C# SBMLDocument.getModel方法代码示例

本文整理汇总了C#中libsbml.SBMLDocument.getModel方法的典型用法代码示例。如果您正苦于以下问题：C# SBMLDocument.getModel方法的具体用法？C# SBMLDocument.getModel怎么用？C# SBMLDocument.getModel使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类libsbml.SBMLDocument的用法示例。

在下文中一共展示了SBMLDocument.getModel方法的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C#代码示例。

示例1: setUp

 public void setUp()
 {
     string filename = "../../annotation/test/test-data/annotationL3.xml";
       d = libsbml.readSBML(filename);
       m = d.getModel();
       c = m.getCompartment(0);
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:7，代码来源:TestL3ModelHistory.cs

示例2: test_SBMLConvertStrict_convertNonStrictSBO

 public void test_SBMLConvertStrict_convertNonStrictSBO()
 {
     SBMLDocument d = new  SBMLDocument(2,4);
       Model m = d.createModel();
       Compartment c = m.createCompartment();
       c.setId( "c");
       c.setConstant(false);
       (c).setSBOTerm(64);
       assertTrue( d.setLevelAndVersion(2,3,true) == false );
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 4 );
       assertTrue( d.setLevelAndVersion(2,2,true) == false );
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 4 );
       assertTrue( d.setLevelAndVersion(2,1,true) == true );
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 1 );
       Compartment c1 = d.getModel().getCompartment(0);
       assertTrue( (c1).getSBOTerm() == -1 );
       assertTrue( d.setLevelAndVersion(1,2,true) == true );
       assertTrue( d.getLevel() == 1 );
       assertTrue( d.getVersion() == 2 );
       Compartment c2 = d.getModel().getCompartment(0);
       assertTrue( (c2).getSBOTerm() == -1 );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:26，代码来源:TestSBMLConvertStrict.cs

示例3: test_SBMLConvertStrict_convertL1ParamRule

 public void test_SBMLConvertStrict_convertL1ParamRule()
 {
     SBMLDocument d = new  SBMLDocument(1,2);
       Model m = d.createModel();
       Compartment c = m.createCompartment();
       c.setId( "c");
       Parameter p = m.createParameter();
       p.setId( "p");
       Parameter p1 = m.createParameter();
       p1.setId( "p1");
       ASTNode math = libsbml.parseFormula("p");
       Rule ar = m.createAssignmentRule();
       ar.setVariable( "p1");
       ar.setMath(math);
       ar.setUnits( "mole");
       assertTrue( d.setLevelAndVersion(2,1,true) == true );
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 1 );
       Rule r1 = d.getModel().getRule(0);
       assertTrue( r1.getUnits() == "" );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:22，代码来源:TestSBMLConvertStrict.cs

示例4: test_ReadSBML_notes

 public void test_ReadSBML_notes()
 {
     Reaction r;
       KineticLaw kl;
       string s = wrapSBML_L2v3("<listOfReactions>" +
     "<reaction name='J1'>" +
     "  <kineticLaw formula='k1*X0'>" +
     "    <notes>This is a test note.</notes>" +
     "    <listOfParameters>" +
     "      <parameter name='k1' value='0'/>" +
     "    </listOfParameters>" +
     "  </kineticLaw>" +
     "</reaction>" +
     "</listOfReactions>");
       D = libsbml.readSBMLFromString(s);
       M = D.getModel();
       r = M.getReaction(0);
       kl = r.getKineticLaw();
       assertTrue( kl.getNotes() != null );
       string notes = kl.getNotes().getChild(0).getCharacters();
       assertTrue( (  "This is a test note." != notes ) == false );
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:22，代码来源:TestReadSBML.cs

示例5: test_Model_ancestor_create

 public void test_Model_ancestor_create()
 {
     SBMLDocument d = new SBMLDocument();
       Model m = d.createModel();
       assertTrue( m.getAncestorOfType(libsbml.SBML_DOCUMENT) == d );
       Model obj = d.getModel();
       assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == d );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:9，代码来源:TestAncestor.cs

示例6: test_ReadSBML_line_col_numbers

        public void test_ReadSBML_line_col_numbers()
        {
            //setXMLParser();

              SBase sb;
              string s = "<?xml version='1.0' encoding='UTF-8'?>\n" +
            "<sbml xmlns='http://www.sbml.org/sbml/level2' level='2' version='1'>\n" +
            "  <model id='testModel' name='testModel'>\n" +
            "    <listOfReactions> <reaction/> </listOfReactions>\n" +
            "  </model>\n" +
            "</sbml>\n";
              D = libsbml.readSBMLFromString(s);
              M = D.getModel();
              assertTrue( M != null );
              sb = M;
              sb = M.getListOfReactions();
              sb = M.getReaction(0);
        }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:18，代码来源:TestReadSBML.cs

示例7: test_SBMLConvert_convertToL3_stoichiometryMath

 public void test_SBMLConvert_convertToL3_stoichiometryMath()
 {
     SBMLDocument d = new  SBMLDocument(2,1);
       Model m = d.createModel();
       Compartment c = m.createCompartment();
       c.setId( "c" );
       Species s = m.createSpecies();
       s.setId( "s");
       s.setCompartment( "c");
       Reaction r = m.createReaction();
       SpeciesReference sr = r.createReactant();
       sr.setSpecies( "s");
       StoichiometryMath sm = sr.createStoichiometryMath();
       ASTNode ast = libsbml.parseFormula("c*2");
       sm.setMath(ast);
       assertTrue( m.getNumRules() == 0 );
       assertTrue( sr.isSetId() == false );
       assertTrue( d.setLevelAndVersion(3,1,false) == true );
       m = d.getModel();
       r = m.getReaction(0);
       sr = r.getReactant(0);
       assertTrue( m.getNumRules() == 1 );
       assertTrue( sr.isSetId() == true );
       Rule rule = m.getRule(0);
       assertTrue( sr.getId() == rule.getVariable() );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:27，代码来源:TestSBMLConvert.cs

示例8: test_SBMLConvert_convertToL2v4_DuplicateAnnotations_model

 public void test_SBMLConvert_convertToL2v4_DuplicateAnnotations_model()
 {
     SBMLDocument d = new  SBMLDocument(2,1);
       Model m = d.createModel();
       string annotation =  "<rdf/>\n<rdf/>";
       int i = (m).setAnnotation(annotation);
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 1 );
       assertTrue( (m).getAnnotation().getNumChildren() == 2 );
       assertTrue( d.setLevelAndVersion(2,4,true) == true );
       assertTrue( d.getLevel() == 2 );
       assertTrue( d.getVersion() == 4 );
       m = d.getModel();
       assertTrue( (m).getAnnotation().getNumChildren() == 1 );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:16，代码来源:TestSBMLConvert.cs

示例9: test_SBMLDocument_setModel3

 public void test_SBMLDocument_setModel3()
 {
     SBMLDocument d = new  SBMLDocument(2,2);
       Model m1 = new  Model(2,2);
       int i = d.setModel(m1);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( d.getModel() != null );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:9，代码来源:TestSBMLDocument.cs

示例10: test_SBMLDocument_setModel

 public void test_SBMLDocument_setModel()
 {
     SBMLDocument d = new  SBMLDocument(2,4);
       Model m1 = new  Model(2,4);
       Model m2 = new  Model(2,4);
       Model mout;
       assertTrue( d.getModel() == null );
       int i = d.setModel(m1);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       mout = d.getModel();
       assertTrue( mout != null );
       assertTrue( mout != m1 );
       i = d.setModel(d.getModel());
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       mout = d.getModel();
       assertTrue( mout != null );
       assertTrue( mout != m1 );
       i = d.setModel(m2);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       mout = d.getModel();
       assertTrue( mout != null );
       assertTrue( mout != m2 );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:24，代码来源:TestSBMLDocument.cs

示例11: test_Model_parent_add

 public void test_Model_parent_add()
 {
     SBMLDocument d = new SBMLDocument(2,4);
       Model m = new Model(2,4);
       d.setModel(m);
       assertTrue( d == d.getModel().getParentSBMLObject() );
       d = null;
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:8，代码来源:TestSBMLParentObject.cs

示例12: test_ReadSBML_Model

 public void test_ReadSBML_Model()
 {
     string s = wrapXML("<sbml level='1' version='1'>" +
     "  <model name='testModel'></model>" +
     "</sbml>");
       D = libsbml.readSBMLFromString(s);
       M = D.getModel();
       assertTrue((  "testModel" == M.getId() ));
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:9，代码来源:TestReadSBML.cs

示例13: test_ReadSBML_Model_L2

 public void test_ReadSBML_Model_L2()
 {
     string s = wrapXML("<sbml level='2' version='1'>" +
     "  <model id='testModel'> </model>" +
     "</sbml>");
       D = libsbml.readSBMLFromString(s);
       M = D.getModel();
       assertEquals( true, M.isSetId() );
       assertEquals( false, M.isSetName() );
       assertTrue((  "testModel" == M.getId() ));
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:11，代码来源:TestReadSBML.cs

示例14: test_ReadSBML_metaid_Unit

 public void test_ReadSBML_metaid_Unit()
 {
     SBase sb;
       UnitDefinition ud;
       string s = wrapSBML_L2v1("<listOfUnitDefinitions>" +
     "  <unitDefinition metaid='ud'>" +
     "    <listOfUnits metaid='lou'>" +
     "      <unit metaid='u'/>" +
     "    </listOfUnits>" +
     "  </unitDefinition>" +
     "</listOfUnitDefinitions>");
       D = libsbml.readSBMLFromString(s);
       M = D.getModel();
       assertTrue( M != null );
       ud = M.getUnitDefinition(0);
       sb = ud;
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "ud" == sb.getMetaId() ));
       sb = ud.getListOfUnits();
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "lou" == sb.getMetaId() ));
       sb = ud.getUnit(0);
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "u" == sb.getMetaId() ));
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:25，代码来源:TestReadSBML.cs

示例15: test_ReadSBML_metaid_Reaction

 public void test_ReadSBML_metaid_Reaction()
 {
     SBase sb;
       Reaction r;
       string s = wrapSBML_L2v1("<listOfReactions>" +
     "  <reaction metaid='r'>" +
     "    <listOfReactants metaid='lor'>" +
     "      <speciesReference metaid='sr1'/>" +
     "    </listOfReactants>" +
     "    <listOfProducts metaid='lop'>" +
     "      <speciesReference metaid='sr2'/>" +
     "    </listOfProducts>" +
     "    <listOfModifiers metaid='lom'>" +
     "      <modifierSpeciesReference metaid='msr'/>" +
     "    </listOfModifiers>" +
     "    <kineticLaw metaid='kl'/>" +
     "  </reaction>" +
     "</listOfReactions>");
       D = libsbml.readSBMLFromString(s);
       M = D.getModel();
       assertTrue( M != null );
       r = M.getReaction(0);
       sb = r;
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "r" == sb.getMetaId() ));
       sb = r.getListOfReactants();
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "lor" == sb.getMetaId() ));
       sb = r.getReactant(0);
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "sr1" == sb.getMetaId() ));
       sb = r.getListOfProducts();
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "lop" == sb.getMetaId() ));
       sb = r.getProduct(0);
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "sr2" == sb.getMetaId() ));
       sb = r.getListOfModifiers();
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "lom" == sb.getMetaId() ));
       sb = r.getModifier(0);
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "msr" == sb.getMetaId() ));
       sb = r.getKineticLaw();
       assertEquals( true, sb.isSetMetaId() );
       assertTrue((  "kl" == sb.getMetaId() ));
 }

开发者ID:mgaldzic，项目名称:copasi_api，代码行数:47，代码来源:TestReadSBML.cs

注：本文中的libsbml.SBMLDocument.getModel方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。