C++ polyMesh::nCells方法代码示例

Foam::labelList Foam::metisDecomp::decompose
(
    const polyMesh& mesh,
    const pointField& points,
    const scalarField& pointWeights
)
{
    if (points.size() != mesh.nCells())
    {
        FatalErrorIn
        (
            "metisDecomp::decompose(const pointField&,const scalarField&)"
        )   << "Can use this decomposition method only for the whole mesh"
            << endl
            << "and supply one coordinate (cellCentre) for every cell." << endl
            << "The number of coordinates " << points.size() << endl
            << "The number of cells in the mesh " << mesh.nCells()
            << exit(FatalError);
    }

    CompactListList<label> cellCells;
    calcCellCells(mesh, identity(mesh.nCells()), mesh.nCells(), cellCells);

    // Decompose using default weights
    labelList decomp;
    decompose(cellCells.m(), cellCells.offsets(), pointWeights, decomp);

    return decomp;
}

Foam::labelList Foam::CuthillMcKeeRenumber::renumber
(
    const polyMesh& mesh,
    const pointField& points
) const
{
    CompactListList<label> cellCells;
    decompositionMethod::calcCellCells
    (
        mesh,
        identity(mesh.nCells()),
        mesh.nCells(),
        false,                      // local only
        cellCells
    );

    labelList orderedToOld = bandCompression(cellCells());

    if (reverse_)
    {
        reverse(orderedToOld);
    }

    return orderedToOld;
}

Foam::labelList Foam::structuredRenumber::renumber
(
    const polyMesh& mesh,
    const pointField& points
) const
{
    if (points.size() != mesh.nCells())
    {
        FatalErrorInFunction
            << "Number of points " << points.size()
            << " should equal the number of cells " << mesh.nCells()
            << exit(FatalError);
    }

    const polyBoundaryMesh& pbm = mesh.boundaryMesh();
    const labelHashSet patchIDs(pbm.patchSet(patches_));

    label nFaces = 0;
    forAllConstIter(labelHashSet, patchIDs, iter)
    {
        nFaces += pbm[iter.key()].size();
    }


    // Extract a submesh.
    labelHashSet patchCells(2*nFaces);
    forAllConstIter(labelHashSet, patchIDs, iter)
    {
        const labelUList& fc = pbm[iter.key()].faceCells();
        forAll(fc, i)
        {
            patchCells.insert(fc[i]);
        }
    }

void Foam::syncTools::swapBoundaryCellPositions
(
    const polyMesh& mesh,
    const UList<point>& cellData,
    List<point>& neighbourCellData
)
{
    if (cellData.size() != mesh.nCells())
    {
        FatalErrorInFunction
            << "Number of cell values " << cellData.size()
            << " is not equal to the number of cells in the mesh "
            << mesh.nCells() << abort(FatalError);
    }

    const polyBoundaryMesh& patches = mesh.boundaryMesh();

    label nBnd = mesh.nFaces()-mesh.nInternalFaces();

    neighbourCellData.setSize(nBnd);

    forAll(patches, patchI)
    {
        const polyPatch& pp = patches[patchI];
        const labelUList& faceCells = pp.faceCells();
        forAll(faceCells, i)
        {
            label bFaceI = pp.start()+i-mesh.nInternalFaces();
            neighbourCellData[bFaceI] = cellData[faceCells[i]];
        }
    }

void Foam::scotchDecomp::calcCSR
(
    const polyMesh& mesh,
    List<int>& adjncy,
    List<int>& xadj
)
{
    // Make Metis CSR (Compressed Storage Format) storage
    //   adjncy      : contains neighbours (= edges in graph)
    //   xadj(celli) : start of information in adjncy for celli

    xadj.setSize(mesh.nCells()+1);

    // Initialise the number of internal faces of the cells to twice the
    // number of internal faces
    label nInternalFaces = 2*mesh.nInternalFaces();

    // Check the boundary for coupled patches and add to the number of
    // internal faces
    const polyBoundaryMesh& pbm = mesh.boundaryMesh();

    forAll(pbm, patchi)
    {
        if (isA<cyclicPolyPatch>(pbm[patchi]))
        {
            nInternalFaces += pbm[patchi].size();
        }
    }

    // Create the adjncy array the size of the total number of internal and
    // coupled faces
    adjncy.setSize(nInternalFaces);

    // Fill in xadj
    // ~~~~~~~~~~~~
    label freeAdj = 0;

    for (label cellI = 0; cellI < mesh.nCells(); cellI++)
    {
        xadj[cellI] = freeAdj;

        const labelList& cFaces = mesh.cells()[cellI];

        forAll(cFaces, i)
        {
            label faceI = cFaces[i];

            if
            (
                mesh.isInternalFace(faceI)
             || isA<cyclicPolyPatch>(pbm[pbm.whichPatch(faceI)])
            )
            {
                freeAdj++;
            }
        }
    }

Foam::labelList Foam::ptscotchDecomp::decompose
(
    const polyMesh& mesh,
    const pointField& points,
    const scalarField& pointWeights
)
{
    if (points.size() != mesh.nCells())
    {
        FatalErrorIn
        (
            "ptscotchDecomp::decompose(const pointField&, const scalarField&)"
        )
            << "Can use this decomposition method only for the whole mesh"
            << endl
            << "and supply one coordinate (cellCentre) for every cell." << endl
            << "The number of coordinates " << points.size() << endl
            << "The number of cells in the mesh " << mesh.nCells()
            << exit(FatalError);
    }

//    // For running sequential ...
//    if (Pstream::nProcs() <= 1)
//    {
//        return scotchDecomp(decompositionDict_, mesh_)
//            .decompose(points, pointWeights);
//    }

    // Make Metis CSR (Compressed Storage Format) storage
    //   adjncy      : contains neighbours (= edges in graph)
    //   xadj(celli) : start of information in adjncy for celli


    CompactListList<label> cellCells;
    calcCellCells(mesh, identity(mesh.nCells()), mesh.nCells(), cellCells);

    // Decompose using default weights
    List<int> finalDecomp;
    decomposeZeroDomains
    (
        mesh.time().path()/mesh.name(),
        cellCells.m(),
        cellCells.offsets(),
        pointWeights,
        finalDecomp
    );

    // Copy back to labelList
    labelList decomp(finalDecomp.size());
    forAll(decomp, i)
    {
        decomp[i] = finalDecomp[i];
    }
    return decomp;
}

Foam::labelList Foam::ptscotchDecomp::decompose
(
    const polyMesh& mesh,
    const labelList& agglom,
    const pointField& agglomPoints,
    const scalarField& pointWeights
)
{
    if (agglom.size() != mesh.nCells())
    {
        FatalErrorIn
        (
            "ptscotchDecomp::decompose(const labelList&, const pointField&)"
        )   << "Size of cell-to-coarse map " << agglom.size()
            << " differs from number of cells in mesh " << mesh.nCells()
            << exit(FatalError);
    }

//    // For running sequential ...
//    if (Pstream::nProcs() <= 1)
//    {
//        return scotchDecomp(decompositionDict_, mesh)
//            .decompose(agglom, agglomPoints, pointWeights);
//    }

    // Make Metis CSR (Compressed Storage Format) storage
    //   adjncy      : contains neighbours (= edges in graph)
    //   xadj(celli) : start of information in adjncy for celli
    CompactListList<label> cellCells;
    calcCellCells(mesh, agglom, agglomPoints.size(), cellCells);

    // Decompose using weights
    List<int> finalDecomp;
    decomposeZeroDomains
    (
        mesh.time().path()/mesh.name(),
        cellCells.m(),
        cellCells.offsets(),
        pointWeights,
        finalDecomp
    );

    // Rework back into decomposition for original mesh
    labelList fineDistribution(agglom.size());

    forAll(fineDistribution, i)
    {
        fineDistribution[i] = finalDecomp[agglom[i]];
    }

    return fineDistribution;
}

//- (optionally destructively) construct from components
Foam::mapDistributePolyMesh::mapDistributePolyMesh
(
    const polyMesh& mesh,
    const label nOldPoints,
    const label nOldFaces,
    const label nOldCells,
    labelList& oldPatchStarts,
    labelList& oldPatchNMeshPoints,

    labelListList& subPointMap,
    labelListList& subFaceMap,
    labelListList& subCellMap,
    labelListList& subPatchMap,
    labelListList& constructPointMap,
    labelListList& constructFaceMap,
    labelListList& constructCellMap,
    labelListList& constructPatchMap,
    const bool reUse                // clone or reuse
)
:
    mesh_(mesh),
    nOldPoints_(nOldPoints),
    nOldFaces_(nOldFaces),
    nOldCells_(nOldCells),
    oldPatchSizes_(oldPatchStarts.size()),
    oldPatchStarts_(oldPatchStarts, reUse),
    oldPatchNMeshPoints_(oldPatchNMeshPoints, reUse),

    pointMap_(mesh.nPoints(), subPointMap, constructPointMap, reUse),
    faceMap_(mesh.nFaces(), subFaceMap, constructFaceMap, reUse),
    cellMap_(mesh.nCells(), subCellMap, constructCellMap, reUse),
    patchMap_(mesh.boundaryMesh().size(), subPatchMap, constructPatchMap, reUse)
{
    calcPatchSizes();
}

Foam::label Foam::meshToMeshNew::calcDistribution
(
    const polyMesh& src,
    const polyMesh& tgt
) const
{
    label procI = 0;

    if (Pstream::parRun())
    {
        List<label> cellsPresentOnProc(Pstream::nProcs(), 0);
        if ((src.nCells() > 0) || (tgt.nCells() > 0))
        {
            cellsPresentOnProc[Pstream::myProcNo()] = 1;
        }
        else
        {
            cellsPresentOnProc[Pstream::myProcNo()] = 0;
        }

        Pstream::gatherList(cellsPresentOnProc);
        Pstream::scatterList(cellsPresentOnProc);

        label nHaveCells = sum(cellsPresentOnProc);

        if (nHaveCells > 1)
        {
            procI = -1;
            if (debug)
            {
                Info<< "meshToMeshNew::calcDistribution: "
                    << "Meshes split across multiple processors" << endl;
            }
        }
        else if (nHaveCells == 1)
        {
            procI = findIndex(cellsPresentOnProc, 1);
            if (debug)
            {
                Info<< "meshToMeshNew::calcDistribution: "
                    << "Meshes local to processor" << procI << endl;
            }
        }
    }

    return procI;
}

// Construct from mesh.  No morphing data: the mesh has not changed
// HJ, 27/Nov/2009
Foam::mapPolyMesh::mapPolyMesh(const polyMesh& mesh)
:
    mesh_(mesh),
    morphing_(false),
    nOldPoints_(mesh.nPoints()),
    nOldFaces_(mesh.nFaces()),
    nOldCells_(mesh.nCells())
{}

Foam::labelList Foam::refinementParameters::findCells(const polyMesh& mesh)
const
{
    // Force calculation of tet-diag decomposition (for use in findCell)
    (void)mesh.tetBasePtIs();

    // Global calculation engine
    globalIndex globalCells(mesh.nCells());

    // Cell label per point
    labelList cellLabels(keepPoints_.size());

    forAll(keepPoints_, i)
    {
        const point& keepPoint = keepPoints_[i];

        label localCellI = mesh.findCell(keepPoint);

        label globalCellI = -1;

        if (localCellI != -1)
        {
            globalCellI = globalCells.toGlobal(localCellI);
        }

        reduce(globalCellI, maxOp<label>());

        if (globalCellI == -1)
        {
            FatalErrorInFunction
                << "Point " << keepPoint
                << " is not inside the mesh or on a face or edge." << nl
                << "Bounding box of the mesh:" << mesh.bounds()
                << exit(FatalError);
        }


        label procI = globalCells.whichProcID(globalCellI);
        label procCellI = globalCells.toLocal(procI, globalCellI);

        Info<< "Found point " << keepPoint << " in cell " << procCellI
            << " on processor " << procI << endl;


        if (globalCells.isLocal(globalCellI))
        {
            cellLabels[i] = localCellI;
        }
        else
        {
            cellLabels[i] = -1;
        }
    }
    return cellLabels;
}

void Foam::meshToMeshNew::writeConnectivity
(
    const polyMesh& src,
    const polyMesh& tgt,
    const labelListList& srcToTargetAddr
) const
{
    Pout<< "Source size = " << src.nCells() << endl;
    Pout<< "Target size = " << tgt.nCells() << endl;

    word fName("addressing_" + src.name() + "_to_" + tgt.name());

    if (Pstream::parRun())
    {
        fName = fName +  "_proc" + Foam::name(Pstream::myProcNo());
    }

    OFstream os(src.time().path()/fName + ".obj");

    label vertI = 0;
    forAll(srcToTargetAddr, i)
    {
        const labelList& tgtAddress = srcToTargetAddr[i];
        forAll(tgtAddress, j)
        {
            label tgtI = tgtAddress[j];
            const vector& c0 = src.cellCentres()[i];

            const cell& c = tgt.cells()[tgtI];
            const pointField pts(c.points(tgt.faces(), tgt.points()));
            forAll(pts, j)
            {
                const point& p = pts[j];
                os  << "v " << p.x() << ' ' << p.y() << ' ' << p.z() << nl;
                vertI++;
                os  << "v " << c0.x() << ' ' << c0.y() << ' ' << c0.z()
                    << nl;
                vertI++;
                os  << "l " << vertI - 1 << ' ' << vertI << nl;
            }
        }
    }

Foam::labelList Foam::metisDecomp::decompose
(
    const polyMesh& mesh,
    const labelList& agglom,
    const pointField& agglomPoints,
    const scalarField& agglomWeights
)
{
    if (agglom.size() != mesh.nCells())
    {
        FatalErrorIn
        (
            "metisDecomp::decompose"
            "(const labelList&, const pointField&, const scalarField&)"
        )   << "Size of cell-to-coarse map " << agglom.size()
            << " differs from number of cells in mesh " << mesh.nCells()
            << exit(FatalError);
    }

    // Make Metis CSR (Compressed Storage Format) storage
    //   adjncy      : contains neighbours (= edges in graph)
    //   xadj(celli) : start of information in adjncy for celli

    CompactListList<label> cellCells;
    calcCellCells(mesh, agglom, agglomPoints.size(), cellCells);

    // Decompose using default weights
    labelList finalDecomp;
    decompose(cellCells.m(), cellCells.offsets(), agglomWeights, finalDecomp);


    // Rework back into decomposition for original mesh
    labelList fineDistribution(agglom.size());

    forAll(fineDistribution, i)
    {
        fineDistribution[i] = finalDecomp[agglom[i]];
    }

    return finalDecomp;
}

cellSet::cellSet
(
    const polyMesh& mesh,
    const word& name,
    readOption r,
    writeOption w
)
:
    topoSet(mesh, typeName, name, r, w)
{
    // Make sure set within valid range
    check(mesh.nCells());
}

// Construct from mesh reference
Foam::polyTopoChange::polyTopoChange(const polyMesh& mesh)
:
    mesh_(mesh),
    addedPoints_(minListSize),
    modifiedPoints_(minListSize),
    removedPoints_
    (
        Foam::max(mesh.allPoints().size()/pointFraction, minListSize)
    ),
    addedFaces_(minListSize),
    modifiedFaces_(minListSize),
    removedFaces_(Foam::max(mesh.allFaces().size()/faceFraction, minListSize)),
    addedCells_(minListSize),
    removedCells_(Foam::max(mesh.nCells()/cellFraction, minListSize))
{}