本文整理汇总了C++中DataInputStream::readDM方法的典型用法代码示例。如果您正苦于以下问题：C++ DataInputStream::readDM方法的具体用法？C++ DataInputStream::readDM怎么用？C++ DataInputStream::readDM使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类DataInputStream的用法示例。
在下文中一共展示了DataInputStream::readDM方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C++代码示例。
示例1: main
//.........这里部分代码省略.........
switch( args_info.inputs_num ) {
case 0:
break; /* inputfilename will be null and indicate stdin as input */
case 1:
inputfilename = args_info.inputs[0];
break;
default: cerr << "Error: you can at most specify one input filename" << endl;
exit(EXIT_FAILURE);
}
if( args_info.outfile_given )
outputfilename = args_info.outfile_arg;
switch ( args_info.input_format_arg ) {
case input_format_arg_phylip:
istream = new PhylipDmInputStream(inputfilename);
break;
case input_format_arg_binary: istream = new BinaryInputStream(inputfilename);
break;
#ifdef WITH_LIBXML
case input_format_arg_xml: istream = new XmlInputStream(inputfilename);
break;
#endif // WITH_LIBXML
default:
exit(EXIT_FAILURE);
}
switch (args_info.output_format_arg) {
case output_format_arg_newick:
ostream = new TreeTextOutputStream(outputfilename);
break;
case output_format_arg_xml:
ostream = new XmlOutputStream(outputfilename);
break;
default:
exit(EXIT_FAILURE);
}
//printf("%d\n", args_info.input_format_arg);
// THE DATA WE WILL PROCESS
vector<Sequence> seqs;
vector<std::string> names;
vector<DNA_b128_String> b128seqs;
Extrainfos extrainfos;
bool latestReadSuccessful = true;
vector<string> speciesnames;
readstatus status;
int run = 0;
status = END_OF_RUN;
while (status == END_OF_RUN && (args_info.input_format_arg == input_format_arg_xml || run<args_info.number_of_runs_arg)) {
string runId("");
run++;
tree2int_map tree2count((size_t)(args_info.bootstraps_arg * 1.3));
str2int_hashmap name2id;
if (args_info.input_format_arg==input_format_arg_binary) {
StrFloMatrix dm;
for (int runNo=1; (status = istream->readDM(dm, names, runId, extrainfos))==DM_READ; runNo++) {
if (args_info.analyze_run_number_given) {
if (runNo<args_info.analyze_run_number_arg)
continue;
if (runNo>args_info.analyze_run_number_arg) {
status=END_OF_RUN;
break;
}
}
for(size_t namei=0; namei<dm.getSize(); namei++)
name2id[dm.getIdentifier(namei)] = namei;
buildTrees(dm, tree2count, methods,name2id);
}
}
else {
StrDblMatrix dm;
for (int runNo=1; (status = istream->readDM(dm, names, runId, extrainfos))==DM_READ; runNo++) {
if (args_info.analyze_run_number_given) {
if (runNo<args_info.analyze_run_number_arg)
continue;
if (runNo>args_info.analyze_run_number_arg) {
status=END_OF_RUN;
break;
}
}
for(size_t namei=0; namei<dm.getSize(); namei++) {
name2id[dm.getIdentifier(namei)] = namei;
}
buildTrees(dm, tree2count, methods,name2id);
}
}
if (status==END_OF_RUN)
ostream->print(tree2count,printCounts, runId, names, extrainfos);
if (args_info.analyze_run_number_given)
break;
}//end run loop
delete ostream;
delete istream;
}
catch(...){
throw;
}
CATCH_EXCEPTION();
cmdline_parser_free(&args_info);
return 0;
}