当前位置: 首页>>代码示例>>C++>>正文


C++ ContigPaths::erase方法代码示例

本文整理汇总了C++中ContigPaths::erase方法的典型用法代码示例。如果您正苦于以下问题:C++ ContigPaths::erase方法的具体用法?C++ ContigPaths::erase怎么用?C++ ContigPaths::erase使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在ContigPaths的用法示例。


在下文中一共展示了ContigPaths::erase方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: handleEstimate


//.........这里部分代码省略.........
				= distanceMap.find(v);
			if (dmIter == distanceMap.end()) {
				// This contig is a repeat.
				ignoredCount++;
				vout << "ignored\n";
				continue;
			}

			// translate distance by -overlap to match
			// coordinate space used by the estimate
			int actualDistance = dmIter->second;
			int diff = actualDistance - ep.distance;
			unsigned buffer = allowedError(ep.stdDev);
			bool invalid = (unsigned)abs(diff) > buffer;
			bool repeat = repeats.count(v.contigIndex()) > 0;
			bool ignored = invalid && repeat;
			if (ignored)
				ignoredCount++;
			else if (invalid)
				invalidCount++;
			else
				validCount++;
			vout << "dist: " << actualDistance
				<< " diff: " << diff
				<< " buffer: " << buffer
				<< " n: " << ep.numPairs
				<< (ignored ? " ignored" : invalid ? " invalid" : "")
				<< '\n';
		}

		if (invalidCount == 0 && validCount > 0)
			++solIter;
		else
			solIter = solutions.erase(solIter);
	}

	vout << "Solutions: " << solutions.size();
	if (tooComplex)
		vout << " (too complex)";
	if (tooManySolutions)
		vout << " (too many solutions)";
	vout << '\n';

	ContigPaths::iterator bestSol = solutions.end();
	int minDiff = 999999;
	for (ContigPaths::iterator solIter = solutions.begin();
			solIter != solutions.end(); ++solIter) {
		map<ContigNode, int> distanceMap
			= makeDistanceMap(g, origin, *solIter);
		int sumDiff = 0;
		for (Estimates::const_iterator iter
					= er.estimates[dirIdx].begin();
				iter != er.estimates[dirIdx].end(); ++iter) {
			ContigNode v = iter->first;
			const DistanceEst& ep = iter->second;
			if (repeats.count(v.contigIndex()) > 0)
				continue;
			map<ContigNode, int>::iterator dmIter
				= distanceMap.find(v);
			assert(dmIter != distanceMap.end());
			int actualDistance = dmIter->second;
			int diff = actualDistance - ep.distance;
			sumDiff += abs(diff);
		}

		if (sumDiff < minDiff) {
开发者ID:genome-vendor,项目名称:abyss,代码行数:67,代码来源:SimpleGraph.cpp


注:本文中的ContigPaths::erase方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台,相关代码片段筛选自各路编程大神贡献的开源项目,源码版权归原作者所有,传播和使用请参考对应项目的License;未经允许,请勿转载。