本文整理汇总了C++中ConsensusMap::reserve方法的典型用法代码示例。如果您正苦于以下问题：C++ ConsensusMap::reserve方法的具体用法？C++ ConsensusMap::reserve怎么用？C++ ConsensusMap::reserve使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类ConsensusMap的用法示例。
在下文中一共展示了ConsensusMap::reserve方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C++代码示例。
示例1: load
void EDTAFile::load(const String& filename, ConsensusMap& consensus_map)
{
// load input
TextFile input(filename);
TextFile::ConstIterator input_it = input.begin();
// reset map
consensus_map = ConsensusMap();
consensus_map.setUniqueId();
char separator = ' ';
if (input_it->hasSubstring("\t"))
separator = '\t';
else if (input_it->hasSubstring(" "))
separator = ' ';
else if (input_it->hasSubstring(","))
separator = ',';
// parsing header line
std::vector<String> headers;
input_it->split(separator, headers);
int offset = 0;
for (Size i = 0; i < headers.size(); ++i)
{
headers[i].trim();
}
String header_trimmed = *input.begin();
header_trimmed.trim();
enum
{
TYPE_UNDEFINED,
TYPE_OLD_NOCHARGE,
TYPE_OLD_CHARGE,
TYPE_CONSENSUS
}
input_type = TYPE_UNDEFINED;
Size input_features = 1;
double rt = 0.0;
double mz = 0.0;
double it = 0.0;
Int ch = 0;
if (headers.size() <= 2)
{
throw Exception::ParseError(__FILE__, __LINE__, __PRETTY_FUNCTION__, "", String("Failed parsing in line 1: not enough columns! Expected at least 3 columns!\nOffending line: '") + header_trimmed + "' (line 1)\n");
}
else if (headers.size() == 3)
input_type = TYPE_OLD_NOCHARGE;
else if (headers.size() == 4)
input_type = TYPE_OLD_CHARGE;
// see if we have a header
try
{
// try to convert... if not: thats a header
rt = headers[0].toDouble();
mz = headers[1].toDouble();
it = headers[2].toDouble();
}
catch (Exception::BaseException&)
{
offset = 1;
++input_it;
LOG_INFO << "Detected a header line.\n";
}
if (headers.size() >= 5)
{
if (String(headers[4].trim()).toUpper() == "RT1")
input_type = TYPE_CONSENSUS;
else
input_type = TYPE_OLD_CHARGE;
}
if (input_type == TYPE_CONSENSUS)
{
// Every consensus style line includes features with four columns.
// The remainder is meta data
input_features = headers.size() / 4;
}
if (offset == 0 && (input_type == TYPE_OLD_CHARGE || input_type == TYPE_CONSENSUS))
{
throw Exception::ParseError(__FILE__, __LINE__, __PRETTY_FUNCTION__, "", String("Failed parsing in line 1: No HEADER provided. This is only allowed for three columns. You have more!\nOffending line: '") + header_trimmed + "' (line 1)\n");
}
SignedSize input_size = input.end() - input.begin();
ConsensusMap::FileDescription desc;
desc.filename = filename;
desc.size = (input_size) - offset;
consensus_map.getFileDescriptions()[0] = desc;
// parsing features
consensus_map.reserve(input_size);
for (; input_it != input.end(); ++input_it)
{
//do nothing for empty lines
//.........这里部分代码省略.........