C++ AnalysisDataPointSetRef类代码示例

本文整理汇总了C++中AnalysisDataPointSetRef类的典型用法代码示例。如果您正苦于以下问题：C++ AnalysisDataPointSetRef类的具体用法？C++ AnalysisDataPointSetRef怎么用？C++ AnalysisDataPointSetRef使用的例子？那么, 这里精选的类代码示例或许可以为您提供帮助。

在下文中一共展示了AnalysisDataPointSetRef类的12个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C++代码示例。

示例1:

void
AnalysisDataModuleManager::notifyPointsAdd(const AnalysisDataPointSetRef &points) const
{
    GMX_ASSERT(impl_->state_ == Impl::eInFrame, "notifyFrameStart() not called");
    // TODO: Add checks for column spans (requires passing the information
    // about the column counts from somewhere).
    //GMX_ASSERT(points.lastColumn() < columnCount(points.dataSetIndex()),
    //           "Invalid columns");
    GMX_ASSERT(points.frameIndex() == impl_->currIndex_,
               "Points do not correspond to current frame");
    if (impl_->bSerialModules_)
    {
        if (!impl_->bAllowMissing_ && !points.allPresent())
        {
            GMX_THROW(APIError("Missing data not supported by a module"));
        }

        Impl::ModuleList::const_iterator i;
        for (i = impl_->modules_.begin(); i != impl_->modules_.end(); ++i)
        {
            if (!i->bParallel)
            {
                i->module->pointsAdded(points);
            }
        }
    }
}

开发者ID:ElsevierSoftwareX，项目名称:SOFTX-D-15-00003，代码行数:27，代码来源:datamodulemanager.cpp

示例2: checker

void
MockAnalysisDataModule::Impl::checkReferencePoints(
        const AnalysisDataPointSetRef &points)
{
    EXPECT_TRUE(frameChecker_.get() != NULL);
    if (frameChecker_.get() != NULL)
    {
        TestReferenceChecker checker(
                frameChecker_->checkCompound("DataValues", NULL));
        checker.checkInteger(points.columnCount(), "Count");
        if (checker.checkPresent(source_->dataSetCount() > 1, "DataSet"))
        {
            checker.checkInteger(points.dataSetIndex(), "DataSet");
        }
        const int  sourceColumnCount = source_->columnCount(points.dataSetIndex());
        const bool bAllColumns       = (points.firstColumn() == 0
                                        && points.columnCount() == sourceColumnCount);
        if (checker.checkPresent(!bAllColumns, "FirstColumn"))
        {
            checker.checkInteger(points.firstColumn(), "FirstColumn");
            checker.checkInteger(points.lastColumn(),  "LastColumn");
        }

        AnalysisDataValuesRef::const_iterator value;
        for (value = points.values().begin(); value != points.values().end(); ++value)
        {
            checkReferenceDataPoint(&checker, *value);
        }
    }
}

开发者ID:exianshine，项目名称:gromacs，代码行数:30，代码来源:mock_datamodule.cpp

示例3: writeValue

void
AnalysisDataPlotModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    if (!isFileOpen())
    {
        return;
    }
    for (int i = 0; i < points.columnCount(); ++i)
    {
        writeValue(points.values()[i]);
    }
}

开发者ID:aalhossary，项目名称:gromacs-HREMD，代码行数:12，代码来源:plot.cpp

示例4:

void
AnalysisDataDisplacementModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    if (points.firstColumn() % _impl->ndim != 0
        || points.columnCount() % _impl->ndim != 0)
    {
        GMX_THROW(APIError("Partial data points"));
    }
    for (int i = 0; i < points.columnCount(); ++i)
    {
        _impl->oldval[_impl->ci + points.firstColumn() + i] = points.y(i);
    }
}

开发者ID:alwanderer，项目名称:gromacs，代码行数:13，代码来源:displacement.cpp

示例5: addPoints

void AnalysisDataFrameAverager::addPoints(const AnalysisDataPointSetRef &points)
{
    const int firstColumn = points.firstColumn();
    GMX_ASSERT(static_cast<size_t>(firstColumn + points.columnCount()) <= values_.size(),
               "Initialized with too few columns");
    for (int i = 0; i < points.columnCount(); ++i)
    {
        if (points.present(i))
        {
            addValue(firstColumn + i, points.y(i));
        }
    }

}

开发者ID:alwanderer，项目名称:gromacs，代码行数:14，代码来源:frameaverager.cpp

示例6: AnalysisDataValuesRef

AnalysisDataPointSetRef::AnalysisDataPointSetRef(
        const AnalysisDataPointSetRef &points, int firstColumn, int columnCount)
    : header_(points.header()), dataSetIndex_(points.dataSetIndex()),
      firstColumn_(0)
{
    GMX_ASSERT(firstColumn >= 0, "Invalid first column");
    GMX_ASSERT(columnCount >= 0, "Invalid column count");
    if (points.lastColumn() < firstColumn
        || points.firstColumn() >= firstColumn + columnCount
        || columnCount == 0)
    {
        return;
    }
    AnalysisDataValuesRef::const_iterator begin = points.values().begin();
    int pointsOffset = firstColumn - points.firstColumn();
    if (pointsOffset > 0)
    {
        // Offset pointer if the first column is not the first in points.
        begin += pointsOffset;
    }
    else
    {
        // Take into account if first column is before the first in points.
        firstColumn_ = -pointsOffset;
        columnCount -= -pointsOffset;
    }
    // Decrease column count if there are not enough columns in points.
    AnalysisDataValuesRef::const_iterator end = begin + columnCount;
    if (pointsOffset + columnCount > points.columnCount())
    {
        end = points.values().end();
    }
    values_ = AnalysisDataValuesRef(begin, end);
}

开发者ID:gromacs，项目名称:gromacs，代码行数:34，代码来源:dataframe.cpp

示例7: value

void
AnalysisDataAverageModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    int firstcol = points.firstColumn();
    for (int i = 0; i < points.columnCount(); ++i)
    {
        if (points.present(i))
        {
            real y = points.y(i);
            value(firstcol + i, 0)  += y;
            value(firstcol + i, 1)  += y * y;
            nsamples_[firstcol + i] += 1;
        }
    }
}

开发者ID:hasagar，项目名称:gromacs，代码行数:15，代码来源:average.cpp

示例8:

void
AnalysisDataFrameAverageModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    AnalysisDataStorageFrame &frame =
        impl_->storage_.currentFrame(points.frameIndex());
    for (int i = 0; i < points.columnCount(); ++i)
    {
        if (points.present(i))
        {
            const real y = points.y(i);
            frame.value(0)      += y;
            impl_->sampleCount_ += 1;
        }
    }
}

开发者ID:hasagar，项目名称:gromacs，代码行数:15，代码来源:average.cpp

示例9: value

void
AnalysisDataVectorPlotModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    if (points.firstColumn() % DIM != 0 || points.columnCount() % DIM != 0)
    {
        GMX_THROW(APIError("Partial data points"));
    }
    if (!isFileOpen())
    {
        return;
    }
    for (int i = 0; i < points.columnCount(); i += 3)
    {
        for (int d = 0; d < DIM; ++d)
        {
            if (bWrite_[i])
            {
                writeValue(points.values()[i + d]);
            }
        }
        if (bWrite_[DIM])
        {
            const rvec        y = { points.y(i), points.y(i + 1), points.y(i + 2) };
            AnalysisDataValue value(norm(y));
            writeValue(value);
        }
    }
}

开发者ID:aalhossary，项目名称:gromacs-HREMD，代码行数:28，代码来源:plot.cpp

示例10:

void
AnalysisDataFrameAverageModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    const int                 dataSet = points.dataSetIndex();
    AnalysisDataStorageFrame &frame   =
        impl_->storage_.currentFrame(points.frameIndex());
    for (int i = 0; i < points.columnCount(); ++i)
    {
        if (points.present(i))
        {
            // TODO: Consider using AnalysisDataFrameAverager
            const real y     = points.y(i);
            const real delta = y - frame.value(dataSet);
            impl_->sampleCount_[dataSet] += 1;
            frame.value(dataSet)         += delta / impl_->sampleCount_[dataSet];
        }
    }
}

开发者ID:ElsevierSoftwareX，项目名称:SOFTX-D-15-00003，代码行数:18，代码来源:average.cpp

示例11: columnCount

void
AbstractAnalysisData::notifyPointsAdd(const AnalysisDataPointSetRef &points) const
{
    GMX_ASSERT(impl_->bInData_, "notifyDataStart() not called");
    GMX_ASSERT(impl_->bInFrame_, "notifyFrameStart() not called");
    GMX_ASSERT(points.lastColumn() < columnCount(), "Invalid columns");
    GMX_ASSERT(points.frameIndex() == impl_->currIndex_,
               "Points do not correspond to current frame");
    if (!impl_->bAllowMissing_ && !points.allPresent())
    {
        GMX_THROW(APIError("Missing data not supported by a module"));
    }

    Impl::ModuleList::const_iterator i;
    for (i = impl_->modules_.begin(); i != impl_->modules_.end(); ++i)
    {
        (*i)->pointsAdded(points);
    }
}

开发者ID:enasyunis，项目名称:gromacs，代码行数:19，代码来源:abstractdata.cpp

示例12: if

void
AnalysisDataLifetimeModule::pointsAdded(const AnalysisDataPointSetRef &points)
{
    const int dataSet = points.dataSetIndex();
    // This assumption is strictly not necessary, but this is how the
    // framework works currently, and makes the code below simpler.
    GMX_ASSERT(points.firstColumn() == 0
               && points.lastColumn() == static_cast<int>(impl_->currentLifetimes_[dataSet].size()) - 1,
               "Point set should cover all columns");
    for (int i = 0; i < points.columnCount(); ++i)
    {
        // TODO: Perhaps add control over how this is determined?
        const bool bPresent = points.present(i) && points.y(i) > 0.0;
        if (bPresent)
        {
            ++impl_->currentLifetimes_[dataSet][i];
        }
        else if (impl_->currentLifetimes_[dataSet][i] > 0)
        {
            impl_->addLifetime(dataSet, impl_->currentLifetimes_[dataSet][i]);
            impl_->currentLifetimes_[dataSet][i] = 0;
        }
    }
}

开发者ID:FoldingAtHome，项目名称:gromacs，代码行数:24，代码来源:lifetime.cpp

注：本文中的AnalysisDataPointSetRef类示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。