当前位置: 首页>>代码示例>>C++>>正文

C++ MatSetFromOptions函数代码示例

本文整理汇总了C++中MatSetFromOptions函数的典型用法代码示例。如果您正苦于以下问题：C++ MatSetFromOptions函数的具体用法？C++ MatSetFromOptions怎么用？C++ MatSetFromOptions使用的例子？那么恭喜您, 这里精选的函数代码示例或许可以为您提供帮助。


在下文中一共展示了MatSetFromOptions函数的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: Assemble

PetscErrorCode Assemble(MPI_Comm comm,PetscInt n,MatType mtype)
{
  Mat A;
  PetscInt first,last,i;
  PetscErrorCode ierr;
  PetscMPIInt rank,size;

  PetscFunctionBegin;
  ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
  ierr = MatSetSizes(A, PETSC_DECIDE,PETSC_DECIDE,n,n);CHKERRQ(ierr);
  ierr = MatSetType(A,MATMPISBAIJ);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A);CHKERRQ(ierr);
  ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
  ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
  if (rank < size-1) {
    ierr = MatMPISBAIJSetPreallocation(A,1,1,PETSC_NULL,1,PETSC_NULL);CHKERRQ(ierr);
  } else {
    ierr = MatMPISBAIJSetPreallocation(A,1,2,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr);
  }
  ierr = MatGetOwnershipRange(A,&first,&last);CHKERRQ(ierr);
  ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr);
  last--;
  for (i=first; i<=last; i++){
    ierr = MatSetValue(A,i,i,2.,INSERT_VALUES);CHKERRQ(ierr);
    if (i != n-1) {ierr = MatSetValue(A,i,n-1,-1.,INSERT_VALUES);CHKERRQ(ierr);}
  }
  ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatDestroy(&A);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
开发者ID:erdc-cm，项目名称:petsc-dev，代码行数:31，代码来源:ex135.c

示例2: MatCreateMPIAIJ

void PETSc::Create(
	MPI_Comm Comm, 
	int ilower, 
	int iupper, 
	int d_nz, 
	int o_nz)
{	
	int n	= iupper - ilower +1;
	
	comm 	= Comm;
	iLower	= ilower;	
	iUpper 	= iupper;	
	
	MatCreateMPIAIJ(PETSC_COMM_WORLD,n,n,PETSC_DECIDE,PETSC_DECIDE,
				d_nz,PETSC_NULL,o_nz,PETSC_NULL,&A);	
	ierr = PetscObjectSetName((PetscObject) A, "A");
	ierr = MatSetFromOptions(A);		
	
	// b
	ierr = VecCreate(PETSC_COMM_WORLD, &b);	
	ierr = PetscObjectSetName((PetscObject) b, "b");
	ierr = VecSetSizes(b, n, PETSC_DECIDE);	
	ierr = VecSetFromOptions(b);
	
	ierr = VecCreate(PETSC_COMM_WORLD,&x);
	ierr = PetscObjectSetName((PetscObject) x, "X");
	ierr = VecSetSizes(x, n, PETSC_DECIDE);	
	ierr = VecSetFromOptions(x);
}
开发者ID:HsinchiangChen，项目名称:LSGFD，代码行数:29，代码来源:solver.cpp

示例3: main

int main(int argc, char *argv[])
{
 	PetscErrorCode ierr;
	params params;

	Mat H; 

	SlepcInitialize(&argc,&argv,(char*)0,help);

	ierr = PetscPrintf(PETSC_COMM_WORLD,"--------------------------------------------------------------------------------------\n");CHKERRQ(ierr);
	ierr = PetscPrintf(PETSC_COMM_WORLD,"               _______ __  __  _______          _______ ______ _______                \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"              |__   __|  \\/  |/ ____\\ \\        / /_   _|  ____|__   __|               \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"                 | |  | \\  / | (___  \\ \\  /\\  / /  | | | |__     | |                  \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"                 | |  | |\\/| |\\___ \\  \\ \\/  \\/ /   | | |  __|    | |                  \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"                 | |  | |  | |____) |  \\  /\\  /   _| |_| |       | |                  \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"                 |_|  |_|  |_|_____/    \\/  \\/   |_____|_|       |_|                  \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"               True Muonium Solver with Iterative Front-Form Techniques               \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"                                                                                      \n");CHKERRQ(ierr);
        ierr = PetscPrintf(PETSC_COMM_WORLD,"--------------------------------------------------------------------------------------\n");CHKERRQ(ierr);


	read_input(ierr,argv,&params);
	print_input(ierr,&params);
	
	if(check_file(params.hfile))
	{
		PetscViewer    viewer_H;
		PetscViewerBinaryOpen(PETSC_COMM_WORLD,params.hfile.c_str(),FILE_MODE_READ,&viewer_H);
		MatCreate(PETSC_COMM_WORLD,&H);
		MatSetFromOptions(H);
		MatLoad(H,viewer_H);
		PetscViewerDestroy(&viewer_H);		

	}else
	{
        	discretize(ierr,&params);
//  	    	ierr = VecView(params.mu,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
//        	ierr = VecView(params.theta,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);

		write_output(ierr,&params);	

        	coulomb_trick(ierr,&params);	
//		ierr = VecView(params.CT,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);

		ct_discrete(ierr,&params);
//		ierr = VecView(params.CT,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);

		hamiltonian(ierr,&params,H);
// 		ierr = PetscViewerSetFormat(PETSC_VIEWER_STDOUT_WORLD,PETSC_VIEWER_ASCII_DENSE);//DENSE<-->COMMON
//	      	MatView(H,PETSC_VIEWER_STDOUT_WORLD);
	}

	cleanup(ierr,&params);	
	eigensolver(ierr,&params,H,argc,argv);

	ierr = MatDestroy(&H);CHKERRQ(ierr);

	ierr = SlepcFinalize();
	return 0;
}
开发者ID:OperaBed，项目名称:TMSWIFT，代码行数:60，代码来源:tmswift.cpp

示例4: main

int main(int argc, char **argv)
{
    Mat            A;
    KSP            ksp;
    DM             shell;
    Vec            *left, *right;
    MPI_Comm       c;
    PetscErrorCode ierr;

    ierr = PetscInitialize(&argc, &argv, NULL, NULL);if (ierr) return ierr;
    c = PETSC_COMM_WORLD;

    ierr = MatCreate(c, &A); CHKERRQ(ierr);
    ierr = MatSetSizes(A, 1, 1, PETSC_DECIDE, PETSC_DECIDE); CHKERRQ(ierr);
    ierr = MatSetFromOptions(A); CHKERRQ(ierr);
    ierr = MatSetUp(A); CHKERRQ(ierr);
    ierr = KSPCreate(c, &ksp); CHKERRQ(ierr);
    ierr = KSPSetOperators(ksp, A, A); CHKERRQ(ierr);
    ierr = KSPSetFromOptions(ksp); CHKERRQ(ierr);
    ierr = DMShellCreate(c, &shell); CHKERRQ(ierr);
    ierr = DMSetFromOptions(shell); CHKERRQ(ierr);
    ierr = DMSetUp(shell); CHKERRQ(ierr);
    ierr = KSPSetDM(ksp, shell); CHKERRQ(ierr);

    ierr = KSPCreateVecs(ksp, 1, &right, 1, &left); CHKERRQ(ierr);
    ierr = VecView(right[0], PETSC_VIEWER_STDOUT_(c));CHKERRQ(ierr);
    ierr = VecDestroyVecs(1,&right); CHKERRQ(ierr);
    ierr = VecDestroyVecs(1,&left); CHKERRQ(ierr);

    ierr = DMDestroy(&shell); CHKERRQ(ierr);
    ierr = KSPDestroy(&ksp); CHKERRQ(ierr);
    ierr = MatDestroy(&A); CHKERRQ(ierr);
    PetscFinalize();
    return 0;
}
开发者ID:tom-klotz，项目名称:petsc，代码行数:35，代码来源:ex45.c

示例5: main

int main(int argc, char **args)
{
  Mat             A;
  MatPartitioning part;
  IS              is;
  PetscInt        i,m,N,rstart,rend,nemptyranks,*emptyranks,nbigranks,*bigranks;
  PetscMPIInt     rank,size;
  PetscErrorCode  ierr;

  ierr = PetscInitialize(&argc,&args,(char*)0,help);CHKERRQ(ierr);
  ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
  ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);

  nemptyranks = 10;
  nbigranks = 10;
  ierr = PetscMalloc2(nemptyranks,PetscInt,&emptyranks,nbigranks,PetscInt,&bigranks);CHKERRQ(ierr);

  ierr = PetscOptionsBegin(PETSC_COMM_WORLD,PETSC_NULL,"Partitioning example options",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscOptionsIntArray("-emptyranks","Ranks to be skipped by partition","",emptyranks,&nemptyranks,PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscOptionsIntArray("-bigranks","Ranks to be overloaded","",bigranks,&nbigranks,PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscOptionsEnd();CHKERRQ(ierr);

  m = 1;
  for (i=0; i<nemptyranks; i++) if (rank == emptyranks[i]) m = 0;
  for (i=0; i<nbigranks; i++) if (rank == bigranks[i]) m = 5;

  ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
  ierr = MatSetSizes(A,m,m,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A);CHKERRQ(ierr);
  ierr = MatSeqAIJSetPreallocation(A,3,PETSC_NULL);CHKERRQ(ierr);
  ierr = MatMPIAIJSetPreallocation(A,3,PETSC_NULL,2,PETSC_NULL);CHKERRQ(ierr);
  ierr = MatSeqBAIJSetPreallocation(A,1,3,PETSC_NULL);CHKERRQ(ierr);
  ierr = MatMPIBAIJSetPreallocation(A,1,3,PETSC_NULL,2,PETSC_NULL);CHKERRQ(ierr);
  ierr = MatSeqSBAIJSetPreallocation(A,1,2,PETSC_NULL);CHKERRQ(ierr);
  ierr = MatMPISBAIJSetPreallocation(A,1,2,PETSC_NULL,1,PETSC_NULL);CHKERRQ(ierr);

  ierr = MatGetSize(A,PETSC_NULL,&N);CHKERRQ(ierr);
  ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
  for (i=rstart; i<rend; i++) {
    const PetscInt cols[] = {(i+N-1)%N,i,(i+1)%N};
    const PetscScalar vals[] = {1,1,1};
    ierr = MatSetValues(A,1,&i,3,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
  }
  ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatView(A,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);

  ierr = MatPartitioningCreate(PETSC_COMM_WORLD,&part);CHKERRQ(ierr);
  ierr = MatPartitioningSetAdjacency(part,A);CHKERRQ(ierr);
  ierr = MatPartitioningSetFromOptions(part);CHKERRQ(ierr);
  ierr = MatPartitioningApply(part,&is);CHKERRQ(ierr);
  ierr = ISView(is,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
  ierr = ISDestroy(&is);CHKERRQ(ierr);
  ierr = MatPartitioningDestroy(&part);CHKERRQ(ierr);
  ierr = MatDestroy(&A);CHKERRQ(ierr);
  ierr = PetscFree2(emptyranks,bigranks);CHKERRQ(ierr);
  ierr = PetscFinalize();
  return 0;
}
开发者ID:Kun-Qu，项目名称:petsc，代码行数:59，代码来源:ex17.c

示例6: main

int main(int argc,char **argv)
{
  PetscErrorCode ierr;
  PetscInt       time_steps = 100,steps;
  PetscMPIInt    size;
  Vec            global;
  PetscReal      dt,ftime;
  TS             ts;
  MatStructure   A_structure;
  Mat            A = 0;

  ierr = PetscInitialize(&argc,&argv,(char*)0,help);CHKERRQ(ierr); 
  ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);

  ierr = PetscOptionsGetInt(PETSC_NULL,"-time",&time_steps,PETSC_NULL);CHKERRQ(ierr);

  /* set initial conditions */
  ierr = VecCreate(PETSC_COMM_WORLD,&global);CHKERRQ(ierr);
  ierr = VecSetSizes(global,PETSC_DECIDE,3);CHKERRQ(ierr);
  ierr = VecSetFromOptions(global);CHKERRQ(ierr);
  ierr = Initial(global,PETSC_NULL);CHKERRQ(ierr);

  /* make timestep context */
  ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr);
  ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr);
  ierr = TSMonitorSet(ts,Monitor,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);

  dt = 0.1;

  /*
    The user provides the RHS and Jacobian
  */
  ierr = TSSetRHSFunction(ts,PETSC_NULL,RHSFunction,NULL);CHKERRQ(ierr);
  ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
  ierr = MatSetSizes(A,PETSC_DECIDE,PETSC_DECIDE,3,3);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A);CHKERRQ(ierr);
  ierr = MatSetUp(A);CHKERRQ(ierr);
  ierr = RHSJacobian(ts,0.0,global,&A,&A,&A_structure,NULL);CHKERRQ(ierr);
  ierr = TSSetRHSJacobian(ts,A,A,RHSJacobian,NULL);CHKERRQ(ierr);

  ierr = TSSetFromOptions(ts);CHKERRQ(ierr);

  ierr = TSSetInitialTimeStep(ts,0.0,dt);CHKERRQ(ierr);
  ierr = TSSetDuration(ts,time_steps,1);CHKERRQ(ierr);
  ierr = TSSetSolution(ts,global);CHKERRQ(ierr);

  ierr = TSSolve(ts,global,&ftime);CHKERRQ(ierr);
  ierr = TSGetTimeStepNumber(ts,&steps);CHKERRQ(ierr);


  /* free the memories */

  ierr = TSDestroy(&ts);CHKERRQ(ierr);
  ierr = VecDestroy(&global);CHKERRQ(ierr);
  ierr= MatDestroy(&A);CHKERRQ(ierr);

  ierr = PetscFinalize();
  return 0;
}
开发者ID:Kun-Qu，项目名称:petsc，代码行数:59，代码来源:ex2.c

示例7: main

int main(int argc, char **args)
{
  Mat             A;
  MatPartitioning part;
  IS              is;
  PetscInt        r,N = 10, start, end;
  PetscErrorCode  ierr;
  
  ierr = PetscInitialize(&argc, &args, (char *) 0, help);CHKERRQ(ierr);
  ierr = PetscOptionsGetInt(PETSC_NULL, "-N", &N, PETSC_NULL);CHKERRQ(ierr);
  ierr = MatCreate(PETSC_COMM_WORLD, &A);CHKERRQ(ierr);
  ierr = MatSetSizes(A, PETSC_DECIDE, PETSC_DECIDE, N, N);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A);CHKERRQ(ierr);
  ierr = MatSeqAIJSetPreallocation(A, 3, PETSC_NULL);CHKERRQ(ierr);
  ierr = MatMPIAIJSetPreallocation(A, 3, PETSC_NULL, 2, PETSC_NULL);CHKERRQ(ierr);

  // Create a linear mesh
  ierr = MatGetOwnershipRange(A, &start, &end);CHKERRQ(ierr);
  for(r = start; r < end; ++r) {
    if (r == 0) {
      PetscInt    cols[2];
      PetscScalar vals[2];

      cols[0] = r;   cols[1] = r+1;
      vals[0] = 1.0; vals[1] = 1.0;
      ierr = MatSetValues(A, 1, &r, 2, cols, vals, INSERT_VALUES);CHKERRQ(ierr);
    } else if (r == N-1) {
      PetscInt    cols[2];
      PetscScalar vals[2];

      cols[0] = r-1; cols[1] = r;
      vals[0] = 1.0; vals[1] = 1.0;
      ierr = MatSetValues(A, 1, &r, 2, cols, vals, INSERT_VALUES);CHKERRQ(ierr);
    } else {
      PetscInt    cols[3];
      PetscScalar vals[3];

      cols[0] = r-1; cols[1] = r;   cols[2] = r+1;
      vals[0] = 1.0; vals[1] = 1.0; vals[2] = 1.0;
      ierr = MatSetValues(A, 1, &r, 3, cols, vals, INSERT_VALUES);CHKERRQ(ierr);
    }
  }
  ierr = MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);

  ierr = MatPartitioningCreate(PETSC_COMM_WORLD, &part);CHKERRQ(ierr);
  ierr = MatPartitioningSetAdjacency(part, A);CHKERRQ(ierr);
  ierr = MatPartitioningSetFromOptions(part);CHKERRQ(ierr);
  //ierr = MatPartitioningSetVertexWeights(part, const PetscInt weights[]);CHKERRQ(ierr);
  //ierr = MatPartitioningSetPartitionWeights(part,const PetscReal weights[]);CHKERRQ(ierr);
  ierr = MatPartitioningApply(part, &is);CHKERRQ(ierr);
  ierr = ISView(is, PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
  ierr = ISDestroy(&is);CHKERRQ(ierr);
  ierr = MatPartitioningDestroy(&part);CHKERRQ(ierr);

  ierr = MatDestroy(&A);CHKERRQ(ierr);
  ierr = PetscFinalize();
  return 0;
}
开发者ID:Kun-Qu，项目名称:petsc，代码行数:59，代码来源:ex15.c

示例8: InitializeProblem

PetscErrorCode InitializeProblem(AppCtx *user)
{
    PetscErrorCode ierr;

    PetscFunctionBegin;
    user->n = 2;
    ierr = VecCreateSeq(PETSC_COMM_SELF,user->n,&user->x);
    CHKERRQ(ierr);
    ierr = VecDuplicate(user->x,&user->xl);
    CHKERRQ(ierr);
    ierr = VecDuplicate(user->x,&user->xu);
    CHKERRQ(ierr);
    ierr = VecSet(user->x,0.0);
    CHKERRQ(ierr);
    ierr = VecSet(user->xl,-1.0);
    CHKERRQ(ierr);
    ierr = VecSet(user->xu,2.0);
    CHKERRQ(ierr);

    user->ne = 1;
    ierr = VecCreateSeq(PETSC_COMM_SELF,user->ne,&user->ce);
    CHKERRQ(ierr);

    user->ni = 2;
    ierr = VecCreateSeq(PETSC_COMM_SELF,user->ni,&user->ci);
    CHKERRQ(ierr);

    ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,user->ne,user->n,user->n,NULL,&user->Ae);
    CHKERRQ(ierr);
    ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,user->ni,user->n,user->n,NULL,&user->Ai);
    CHKERRQ(ierr);
    ierr = MatSetFromOptions(user->Ae);
    CHKERRQ(ierr);
    ierr = MatSetFromOptions(user->Ai);
    CHKERRQ(ierr);


    ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,user->n,user->n,1,NULL,&user->H);
    CHKERRQ(ierr);
    ierr = MatSetFromOptions(user->H);
    CHKERRQ(ierr);
    CHKERRQ(ierr);

    PetscFunctionReturn(0);
}
开发者ID:tom-klotz，项目名称:petsc，代码行数:45，代码来源:toy.c

示例9: loadMat

PetscErrorCode loadMat(const char *path, Mat* A, MPI_Comm comm, MatType type, PetscViewer* fd){
    PetscErrorCode err;
    err = PetscViewerBinaryOpen(comm, path, FILE_MODE_READ, fd); CHKERRQ(err);
    err = MatCreate(comm, A); CHKERRQ(err);
    err = MatSetType(*A, type); CHKERRQ(err);
    err = MatSetFromOptions(*A); CHKERRQ(err);
    err = MatLoad(*A, *fd); CHKERRQ(err);
    err = PetscViewerDestroy(fd); CHKERRQ(err);
    return err;
}
开发者ID:wedmonster，项目名称:pbear，代码行数:10，代码来源:query.c

示例10: MatSetLocalToGlobalMapping_IS

PetscErrorCode MatSetLocalToGlobalMapping_IS(Mat A,ISLocalToGlobalMapping rmapping,ISLocalToGlobalMapping cmapping)
{
  PetscErrorCode ierr;
  PetscInt       n,bs;
  Mat_IS         *is = (Mat_IS*)A->data;
  IS             from,to;
  Vec            global;

  PetscFunctionBegin;
  PetscCheckSameComm(A,1,rmapping,2);
  if (rmapping != cmapping) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_INCOMP,"MATIS requires the row and column mappings to be identical");
  if (is->mapping) { /* Currenly destroys the objects that will be created by this routine. Is there anything else that should be checked? */
    ierr = ISLocalToGlobalMappingDestroy(&is->mapping);CHKERRQ(ierr);
    ierr = VecDestroy(&is->x);CHKERRQ(ierr);
    ierr = VecDestroy(&is->y);CHKERRQ(ierr);
    ierr = VecScatterDestroy(&is->ctx);CHKERRQ(ierr);
    ierr = MatDestroy(&is->A);CHKERRQ(ierr);
  }
  ierr = PetscObjectReference((PetscObject)rmapping);CHKERRQ(ierr);
  ierr = ISLocalToGlobalMappingDestroy(&is->mapping);CHKERRQ(ierr);
  is->mapping = rmapping;
/*
  ierr = PetscLayoutSetISLocalToGlobalMapping(A->rmap,rmapping);CHKERRQ(ierr);
  ierr = PetscLayoutSetISLocalToGlobalMapping(A->cmap,cmapping);CHKERRQ(ierr);
*/

  /* Create the local matrix A */
  ierr = ISLocalToGlobalMappingGetSize(rmapping,&n);CHKERRQ(ierr);
  ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
  ierr = MatCreate(PETSC_COMM_SELF,&is->A);CHKERRQ(ierr);
  ierr = MatSetSizes(is->A,n,n,n,n);CHKERRQ(ierr);
  ierr = MatSetBlockSize(is->A,bs);CHKERRQ(ierr);
  ierr = MatSetOptionsPrefix(is->A,((PetscObject)A)->prefix);CHKERRQ(ierr);
  ierr = MatAppendOptionsPrefix(is->A,"is_");CHKERRQ(ierr);
  ierr = MatSetFromOptions(is->A);CHKERRQ(ierr);

  /* Create the local work vectors */
  ierr = VecCreate(PETSC_COMM_SELF,&is->x);CHKERRQ(ierr);
  ierr = VecSetBlockSize(is->x,bs);CHKERRQ(ierr);
  ierr = VecSetSizes(is->x,n,n);CHKERRQ(ierr);
  ierr = VecSetOptionsPrefix(is->x,((PetscObject)A)->prefix);CHKERRQ(ierr);
  ierr = VecAppendOptionsPrefix(is->x,"is_");CHKERRQ(ierr);
  ierr = VecSetFromOptions(is->x);CHKERRQ(ierr);
  ierr = VecDuplicate(is->x,&is->y);CHKERRQ(ierr);

  /* setup the global to local scatter */
  ierr = ISCreateStride(PETSC_COMM_SELF,n,0,1,&to);CHKERRQ(ierr);
  ierr = ISLocalToGlobalMappingApplyIS(rmapping,to,&from);CHKERRQ(ierr);
  ierr = MatGetVecs(A,&global,NULL);CHKERRQ(ierr);
  ierr = VecScatterCreate(global,from,is->x,to,&is->ctx);CHKERRQ(ierr);
  ierr = VecDestroy(&global);CHKERRQ(ierr);
  ierr = ISDestroy(&to);CHKERRQ(ierr);
  ierr = ISDestroy(&from);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
开发者ID:OpenCMISS-Dependencies，项目名称:petsc，代码行数:55，代码来源:matis.c

示例11: main

   -fout <file> : output file name\n\n";

#include <petscmat.h>

#undef __FUNCT__
#define __FUNCT__ "main"
int main(int argc,char **args)
{
  Mat            A;
  Vec            b;
  char           fileout[PETSC_MAX_PATH_LEN];
  PetscInt       i,j,m = 6,n = 6,N = 36,Ii,J;
  PetscErrorCode ierr;
  PetscScalar    val,v;
  PetscViewer    view;

  ierr = PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr;
  ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
  ierr = MatSetSizes(A,PETSC_DECIDE,PETSC_DECIDE,N,N);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A);CHKERRQ(ierr);
  for (i=0; i<m; i++) {
    for (j=0; j<n; j++) {
      v = -1.0;  Ii = j + n*i;
      if (i>0)   {J = Ii - n; ierr = MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
      if (i<m-1) {J = Ii + n; ierr = MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
      if (j>0)   {J = Ii - 1; ierr = MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
      if (j<n-1) {J = Ii + 1; ierr = MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
      v = 4.0; ierr = MatSetValues(A,1,&Ii,1,&Ii,&v,INSERT_VALUES);CHKERRQ(ierr);
    }
  }
  ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);

  ierr = VecCreate(PETSC_COMM_WORLD,&b);CHKERRQ(ierr);
  ierr = VecSetSizes(b,PETSC_DECIDE,N);CHKERRQ(ierr);
  ierr = VecSetFromOptions(b);CHKERRQ(ierr);
  for (i=0; i<N; i++) {
    val  = i + 1;
    ierr = VecSetValues(b,1,&i,&val,INSERT_VALUES);CHKERRQ(ierr);
  }
  ierr = VecAssemblyBegin(b);CHKERRQ(ierr);
  ierr = VecAssemblyEnd(b);CHKERRQ(ierr);

  ierr = PetscOptionsGetString(NULL,NULL,"-fout",fileout,PETSC_MAX_PATH_LEN,NULL);CHKERRQ(ierr);
  ierr = PetscViewerBinaryOpen(PETSC_COMM_WORLD,fileout,FILE_MODE_WRITE,&view);CHKERRQ(ierr);
  ierr = MatView(A,view);CHKERRQ(ierr);
  ierr = VecView(b,view);CHKERRQ(ierr);
  ierr = PetscViewerDestroy(&view);CHKERRQ(ierr);

  ierr = VecDestroy(&b);CHKERRQ(ierr);
  ierr = MatDestroy(&A);CHKERRQ(ierr);

  ierr = PetscFinalize();
  return ierr;
}
开发者ID:tom-klotz，项目名称:petsc，代码行数:55，代码来源:ex33.c

示例12: readMatrixPetsc

int readMatrixPetsc(const char* matrixFileName, PRIMME_INT *m, PRIMME_INT *n,
      PRIMME_INT *mLocal, PRIMME_INT *nLocal, int *numProcs, int *procID,
      Mat **matrix, double *fnorm_, int **perm) {

   PetscErrorCode ierr;
   PetscReal fnorm;
   PetscBool pattern;
   PetscViewer viewer;
   PetscInt m0, n0, mLocal0, nLocal0;

   PetscFunctionBegin;

   *matrix = (Mat *)primme_calloc(1, sizeof(Mat), "mat");
   if (!strcmp("mtx", &matrixFileName[strlen(matrixFileName)-3])) {  
      // coordinate format storing both lower and upper triangular parts
      ierr = loadmtx(matrixFileName, *matrix, &pattern); CHKERRQ(ierr);
   }
   else if (!strcmp("petsc", &matrixFileName[strlen(matrixFileName)-5])) {
      ierr = PetscViewerBinaryOpen(PETSC_COMM_WORLD, matrixFileName, FILE_MODE_READ, &viewer); CHKERRQ(ierr);
      ierr = MatCreate(PETSC_COMM_WORLD, *matrix); CHKERRQ(ierr);
      ierr = MatSetFromOptions(**matrix); CHKERRQ(ierr);
      ierr = MatLoad(**matrix, viewer); CHKERRQ(ierr);
      ierr = PetscViewerDestroy(&viewer); CHKERRQ(ierr);
   }
   else {
      SETERRQ(PETSC_COMM_WORLD, PETSC_ERR_SUP, "Could not read matrix file.");
   }
   if (fnorm_) {
      ierr = MatNorm(**matrix, NORM_FROBENIUS, &fnorm); CHKERRQ(ierr);
      *fnorm_ = fnorm;
   }

   ierr = MatGetSize(**matrix, &m0, &n0); CHKERRQ(ierr);
   *m = m0;
   *n = n0;

   if (perm && *m == *n) {
      Mat Atemp;
      ierr = permutematrix(**matrix, NULL, &Atemp, NULL, perm);CHKERRQ(ierr);
      ierr = MatDestroy(*matrix);CHKERRQ(ierr);
      **matrix = Atemp;
   }
   else if (perm) {
      *perm = NULL;
   }

   ierr = MatGetLocalSize(**matrix, &mLocal0, &nLocal0); CHKERRQ(ierr);
   *mLocal = mLocal0;
   *nLocal = nLocal0;
   MPI_Comm_size(MPI_COMM_WORLD, numProcs);
   MPI_Comm_rank(MPI_COMM_WORLD, procID);

   PetscFunctionReturn(0);
}
开发者ID:primme，项目名称:primme，代码行数:54，代码来源:petscw.c

示例13: fill

PetscErrorCode fill(Mat m, Vec v)
{
  PetscInt       idxn[3] = {0, 1, 2};
  PetscInt       localRows = 0;
  PetscMPIInt    rank,size;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MPI_Comm_rank(MPI_COMM_WORLD, &rank);CHKERRQ(ierr);
  ierr = MPI_Comm_size(MPI_COMM_WORLD, &size);CHKERRQ(ierr);  

  if (rank == 1 || rank == 2) localRows = 4;
  if (size == 1) localRows = 8;
  ierr = MatSetSizes(m, localRows, PETSC_DECIDE, PETSC_DECIDE, 3);CHKERRQ(ierr);
  ierr = VecSetSizes(v, localRows, PETSC_DECIDE);CHKERRQ(ierr);

  ierr = MatSetFromOptions(m);CHKERRQ(ierr);
  ierr = VecSetFromOptions(v);CHKERRQ(ierr);
  ierr = MatSetUp(m);CHKERRQ(ierr);

  if (size == 1) {
    PetscInt    idxm1[4] = {0, 1, 2, 3};
    PetscScalar values1[12] = {1, 0, 0, 1, 0, 1, 1, 1, 0, 1, 1, 1};
    PetscInt    idxm2[4] = {4, 5, 6, 7};
    PetscScalar values2[12] = {1, 2, 0, 1, 2, 1, 1, 3, 0, 1, 3, 1};

    ierr = MatSetValues(m, 4, idxm1, 3, idxn, values1, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 0, 1.1, INSERT_VALUES); VecSetValue(v, 1, 2.5, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 2, 3, INSERT_VALUES); VecSetValue(v, 3, 4, INSERT_VALUES);CHKERRQ(ierr);

    ierr = MatSetValues(m, 4, idxm2, 3, idxn, values2, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 4, 5, INSERT_VALUES); VecSetValue(v, 5, 6, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 6, 7, INSERT_VALUES); VecSetValue(v, 7, 8, INSERT_VALUES);CHKERRQ(ierr);
  } else if (rank == 1) {
    PetscInt    idxm[4] = {0, 1, 2, 3};
    PetscScalar values[12] = {1, 0, 0, 1, 0, 1, 1, 1, 0, 1, 1, 1};

    ierr = MatSetValues(m, 4, idxm, 3, idxn, values, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 0, 1.1, INSERT_VALUES); VecSetValue(v, 1, 2.5, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 2, 3, INSERT_VALUES); VecSetValue(v, 3, 4, INSERT_VALUES);CHKERRQ(ierr);
  } else if (rank == 2) {
    PetscInt    idxm[4] = {4, 5, 6, 7};
    PetscScalar values[12] = {1, 2, 0, 1, 2, 1, 1, 3, 0, 1, 3, 1};

    ierr = MatSetValues(m, 4, idxm, 3, idxn, values, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 4, 5, INSERT_VALUES); VecSetValue(v, 5, 6, INSERT_VALUES);CHKERRQ(ierr);
    ierr = VecSetValue(v, 6, 7, INSERT_VALUES); VecSetValue(v, 7, 8, INSERT_VALUES);CHKERRQ(ierr);
  }
  ierr = MatAssemblyBegin(m, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(m, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = VecAssemblyBegin(v);CHKERRQ(ierr);
  ierr = VecAssemblyEnd(v);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
开发者ID:firedrakeproject，项目名称:petsc，代码行数:54，代码来源:ex54.c

示例14: main

int main(int argc,char **args)
{
  Mat                 A1,A2,A3,A4,nest;
  Mat                 mata[4];
  Mat                 aij;
  MPI_Comm            comm;
  PetscInt            m,n,istart,iend,ii,i,J,j;
  PetscScalar         v;
  PetscMPIInt         size;
  PetscErrorCode      ierr;

  ierr = PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr;
  comm = PETSC_COMM_WORLD;
  ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
  /*
     Assemble the matrix for the five point stencil, YET AGAIN
  */
  ierr = MatCreate(comm,&A1);CHKERRQ(ierr);
  m=2,n=2;
  ierr = MatSetSizes(A1,PETSC_DECIDE,PETSC_DECIDE,m*n,m*n);CHKERRQ(ierr);
  ierr = MatSetFromOptions(A1);CHKERRQ(ierr);
  ierr = MatSetUp(A1);CHKERRQ(ierr);
  ierr = MatGetOwnershipRange(A1,&istart,&iend);CHKERRQ(ierr);
  for (ii=istart; ii<iend; ii++) {
    v = -1.0; i = ii/n; j = ii - i*n;
    if (i>0)   {J = ii - n; ierr = MatSetValues(A1,1,&ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
    if (i<m-1) {J = ii + n; ierr = MatSetValues(A1,1,&ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
    if (j>0)   {J = ii - 1; ierr = MatSetValues(A1,1,&ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
    if (j<n-1) {J = ii + 1; ierr = MatSetValues(A1,1,&ii,1,&J,&v,INSERT_VALUES);CHKERRQ(ierr);}
    v = 4.0; ierr = MatSetValues(A1,1,&ii,1,&ii,&v,INSERT_VALUES);CHKERRQ(ierr);
  }
  ierr = MatAssemblyBegin(A1,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A1,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatView(A1,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
  ierr = MatDuplicate(A1,MAT_COPY_VALUES,&A2);CHKERRQ(ierr);
  ierr = MatDuplicate(A1,MAT_COPY_VALUES,&A3);CHKERRQ(ierr);
  ierr = MatDuplicate(A1,MAT_COPY_VALUES,&A4);CHKERRQ(ierr);
  /*create a nest matrix */
  ierr = MatCreate(comm,&nest);CHKERRQ(ierr);
  ierr = MatSetType(nest,MATNEST);CHKERRQ(ierr);
  mata[0]=A1,mata[1]=A2,mata[2]=A3,mata[3]=A4;
  ierr = MatNestSetSubMats(nest,2,NULL,2,NULL,mata);CHKERRQ(ierr);
  ierr = MatSetUp(nest);CHKERRQ(ierr);
  ierr = MatConvert(nest,MATAIJ,MAT_INITIAL_MATRIX,&aij);CHKERRQ(ierr);
  ierr = MatView(aij,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
  ierr = MatDestroy(&nest);CHKERRQ(ierr);
  ierr = MatDestroy(&aij);CHKERRQ(ierr);
  ierr = MatDestroy(&A1);CHKERRQ(ierr);
  ierr = MatDestroy(&A2);CHKERRQ(ierr);
  ierr = MatDestroy(&A3);CHKERRQ(ierr);
  ierr = MatDestroy(&A4);CHKERRQ(ierr);
  ierr = PetscFinalize();
  return ierr;
}
开发者ID:firedrakeproject，项目名称:petsc，代码行数:54，代码来源:ex195.c

示例15: MatCreate

void SingleLongPipe::initialize() {
  MatCreate(PETSC_COMM_WORLD, &M);
  MatSetSizes(M, local_n, local_n, global_n, global_n);
  MatSetFromOptions(M);
  MatMPIAIJSetPreallocation(M, 2, nullptr, 2, nullptr);
  MatSeqAIJSetPreallocation(M, 2, nullptr);
  MatSetUp(M);
  KSPCreate(PETSC_COMM_WORLD, &ksp);
  KSPSetOperators(ksp, M, M);
  KSPSetFromOptions(ksp);
  KSPSetUp(ksp);
}
开发者ID:whyzidane，项目名称:CO2_project，代码行数:12，代码来源:single_long_pipe_class.cpp


注：本文中的MatSetFromOptions函数示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。