Python torch.sum函数代码示例

    def _test_jacobian(self, input_dim, hidden_dim):
        jacobian = torch.zeros(input_dim, input_dim)
        iaf = InverseAutoregressiveFlow(input_dim, hidden_dim, sigmoid_bias=0.5)

        def nonzero(x):
            return torch.sign(torch.abs(x))

        x = torch.randn(1, input_dim)
        iaf_x = iaf(x)
        analytic_ldt = iaf.log_abs_det_jacobian(x, iaf_x).data.sum()

        for j in range(input_dim):
            for k in range(input_dim):
                epsilon_vector = torch.zeros(1, input_dim)
                epsilon_vector[0, j] = self.epsilon
                iaf_x_eps = iaf(x + epsilon_vector)
                delta = (iaf_x_eps - iaf_x) / self.epsilon
                jacobian[j, k] = float(delta[0, k].data.sum())

        permutation = iaf.arn.get_permutation()
        permuted_jacobian = jacobian.clone()
        for j in range(input_dim):
            for k in range(input_dim):
                permuted_jacobian[j, k] = jacobian[permutation[j], permutation[k]]
        numeric_ldt = torch.sum(torch.log(torch.diag(permuted_jacobian)))
        ldt_discrepancy = np.fabs(analytic_ldt - numeric_ldt)

        diag_sum = torch.sum(torch.diag(nonzero(permuted_jacobian)))
        lower_sum = torch.sum(torch.tril(nonzero(permuted_jacobian), diagonal=-1))

        assert ldt_discrepancy < self.epsilon
        assert diag_sum == float(input_dim)
        assert lower_sum == float(0.0)

    def norm_flow(self, params, z, v, logposterior):

        h = F.tanh(params[0][0](z))
        mew_ = params[0][1](h)
        sig_ = F.sigmoid(params[0][2](h)+5.) #[PB,Z]


        z_reshaped = z.view(self.P, self.B, self.z_size)

        gradients = torch.autograd.grad(outputs=logposterior(z_reshaped), inputs=z_reshaped,
                          grad_outputs=self.grad_outputs,
                          create_graph=True, retain_graph=True, only_inputs=True)[0]
        gradients = gradients.detach()

        gradients = gradients.view(-1,self.z_size)


        v = v*sig_ + mew_*gradients

        logdet = torch.sum(torch.log(sig_), 1)


        h = F.tanh(params[1][0](v))
        mew_ = params[1][1](h)
        sig_ = F.sigmoid(params[1][2](h)+5.) #[PB,Z]

        z = z*sig_ + mew_*v

        logdet2 = torch.sum(torch.log(sig_), 1)

        #[PB]
        logdet = logdet + logdet2
        
        #[PB,Z], [PB]
        return z, v, logdet

    def f1_score_macro(y_true, y_pred, per_class=False, threshold=0.5):
        '''
        Macro f1

        y_true: [bs, classes, x, y]
        y_pred: [bs, classes, x, y]

        Tested: same results as sklearn f1 macro
        '''
        y_true = y_true.byte()
        y_pred = y_pred > threshold

        y_true = y_true.permute(0, 2, 3, 1)
        y_pred = y_pred.permute(0, 2, 3, 1)

        y_true = y_true.contiguous().view(-1, y_true.size()[3])  # [bs*x*y, classes]
        y_pred = y_pred.contiguous().view(-1, y_pred.size()[3])

        f1s = []
        for i in range(y_true.size()[1]):
            intersect = torch.sum(y_true[:, i] * y_pred[:, i])  # works because all multiplied by 0 gets 0
            denominator = torch.sum(y_true[:, i]) + torch.sum(y_pred[:, i])  # works because all multiplied by 0 gets 0
            #maybe have to cast to float here (for python3 ??) otherwise always 0
            # f1 = (2 * intersect) / (denominator + 1e-6)
            f1 = (2 * intersect.float()) / (denominator.float() + 1e-6)
            f1s.append(f1)
        if per_class:
            return np.array(f1s)
        else:
            return np.mean(np.array(f1s))

def get_reinforce_ps_loss(phi, p0, reinforce = False):
    # returns pseudoloss: loss whose gradient is unbiased for the
    # true gradient

    d = len(p0)
    e_b = sigmoid(phi)

    bn_rv = Bernoulli(probs = torch.ones(d) * e_b)
    binary_samples = bn_rv.sample().detach()
    # binary_samples = (torch.rand(d) > e_b).float().detach()

    if reinforce:
        binary_samples_ = bn_rv.sample().detach()
        baseline = torch.sum((binary_samples_ - p0)**2)

    else:
        baseline = 0.0

    sampled_loss = torch.sum((binary_samples - p0)**2)

    # probs, draw_array = get_all_probs(e_b, d)
    # losses_array = get_losses_from_draw_array(draw_array, p0)
    #
    # cat_rv = Categorical(probs)
    # indx = cat_rv.sample()
    # binary_samples = draw_array[indx]
    # sampled_loss = losses_array[indx]
    #
    sampled_log_q = get_bernoulli_log_prob(e_b, binary_samples)

    ps_loss = (sampled_loss - baseline).detach() * sampled_log_q

    return ps_loss

def iou(pr, gt, eps=1e-7, threshold=None, activation='sigmoid'):
    """
    Source:
        https://github.com/catalyst-team/catalyst/
    Args:
        pr (torch.Tensor): A list of predicted elements
        gt (torch.Tensor):  A list of elements that are to be predicted
        eps (float): epsilon to avoid zero division
        threshold: threshold for outputs binarization
    Returns:
        float: IoU (Jaccard) score
    """

    if activation is None or activation == "none":
        activation_fn = lambda x: x
    elif activation == "sigmoid":
        activation_fn = torch.nn.Sigmoid()
    elif activation == "softmax2d":
        activation_fn = torch.nn.Softmax2d()
    else:
        raise NotImplementedError(
            "Activation implemented for sigmoid and softmax2d"
        )

    pr = activation_fn(pr)

    if threshold is not None:
        pr = (pr > threshold).float()

    intersection = torch.sum(gt * pr)
    union = torch.sum(gt) + torch.sum(pr) - intersection + eps
    return (intersection + eps) / union

def calculate_variance_term(pred, gt, means, n_objects, delta_v, norm=2):
    """pred: bs, height * width, n_filters
       gt: bs, height * width, n_instances
       means: bs, n_instances, n_filters"""

    bs, n_loc, n_filters = pred.size()
    n_instances = gt.size(2)

    # bs, n_loc, n_instances, n_filters
    means = means.unsqueeze(1).expand(bs, n_loc, n_instances, n_filters)
    # bs, n_loc, n_instances, n_filters
    pred = pred.unsqueeze(2).expand(bs, n_loc, n_instances, n_filters)
    # bs, n_loc, n_instances, n_filters
    gt = gt.unsqueeze(3).expand(bs, n_loc, n_instances, n_filters)

    _var = (torch.clamp(torch.norm((pred - means), norm, 3) -
                        delta_v, min=0.0) ** 2) * gt[:, :, :, 0]

    var_term = 0.0
    for i in range(bs):
        _var_sample = _var[i, :, :n_objects[i]]  # n_loc, n_objects
        _gt_sample = gt[i, :, :n_objects[i], 0]  # n_loc, n_objects

        var_term += torch.sum(_var_sample) / torch.sum(_gt_sample)
    var_term = var_term / bs

    return var_term

    def forward(self, true_binary, rule_masks, raw_logits):
        if cmd_args.loss_type == 'binary':
            exp_pred = torch.exp(raw_logits) * rule_masks

            norm = F.torch.sum(exp_pred, 2, keepdim=True)
            prob = F.torch.div(exp_pred, norm)

            return F.binary_cross_entropy(prob, true_binary) * cmd_args.max_decode_steps

        if cmd_args.loss_type == 'perplexity':
            return my_perp_loss(true_binary, rule_masks, raw_logits)

        if cmd_args.loss_type == 'vanilla':
            exp_pred = torch.exp(raw_logits) * rule_masks + 1e-30
            norm = torch.sum(exp_pred, 2, keepdim=True)
            prob = torch.div(exp_pred, norm)

            ll = F.torch.abs(F.torch.sum( true_binary * prob, 2))
            mask = 1 - rule_masks[:, :, -1]
            logll = mask * F.torch.log(ll)

            loss = -torch.sum(logll) / true_binary.size()[1]
            
            return loss
        print('unknown loss type %s' % cmd_args.loss_type)
        raise NotImplementedError

    def reverse_flow(self, z):

        B = z.shape[0]
        C = z.shape[1]
        f = self.flows

        logdet = 0.
        reverse_ = list(range(self.n_flows))[::-1]
        for i in reverse_:
            z1 = z[:,:C//2]
            z2 = z[:,C//2:]
            sig1 = torch.sigmoid(f[str(i)]['f2_sig'](z1))
            mu1 = f[str(i)]['f2_mu'](z1)

            z2 = (z2 - mu1) / sig1

            sig2 = torch.sigmoid(f[str(i)]['f1_sig'](z2))
            mu2 = f[str(i)]['f1_mu'](z2)

            z1 = (z1 - mu2) / sig2
            
            z = torch.cat([z1,z2],1)
            z = z[:,f[str(i)]['inv_perm']]

            sig1 = sig1.view(B, -1)
            sig2 = sig2.view(B, -1)
            logdet += torch.sum(torch.log(sig1), 1)
            logdet += torch.sum(torch.log(sig2), 1)

        return z, logdet

    def forward_flow(self, z, xenc):

        B = z.shape[0]
        C = z.shape[1]
        f = self.flows
        logdet = 0.
        for i in range(self.n_flows):
            z = z[:,f[str(i)]['perm']]
            z1 = z[:,:C//2]
            z2 = z[:,C//2:]

            sig2 = torch.sigmoid(f[str(i)]['f1_sig'](torch.cat([z2,xenc],1)))
            mu2 = f[str(i)]['f1_mu'](torch.cat([z2,xenc],1))

            z1 = z1*sig2 + mu2

            mu1 = f[str(i)]['f2_mu'](torch.cat([z1,xenc],1))
            sig1 = torch.sigmoid(f[str(i)]['f2_sig'](torch.cat([z1,xenc],1)))

            z2 = z2*sig1 + mu1
            z = torch.cat([z1,z2],1)

            sig1 = sig1.view(B, -1)
            sig2 = sig2.view(B, -1)
            logdet += torch.sum(torch.log(sig1), 1)
            logdet += torch.sum(torch.log(sig2), 1)

        return z, logdet

def test_fun_weak(model,loss_fn,dataloader,dataloader_neg,batch_tnf,use_cuda=True,triplet=False,tps_grid_regularity_loss=0):
    model.eval()
    test_loss = 0
    if dataloader_neg is not None: 
        dataloader_neg_iter=iter(dataloader_neg)
    for batch_idx, batch in enumerate(dataloader):
        batch = batch_tnf(batch)
        if dataloader_neg is not None: 
            batch_neg = next(dataloader_neg_iter)
            batch_neg = batch_tnf(batch_neg)
            theta_pos,corr_pos,theta_neg,corr_neg = model(batch, batch_neg)
            inliers_pos = loss_fn(theta_pos,corr_pos)            
            inliers_neg = loss_fn(theta_neg,corr_neg)
            loss = torch.sum(inliers_neg - inliers_pos)
        elif dataloader_neg is None and triplet==False:
            theta,corr = model(batch)
            loss = loss_fn(theta,corr)
        elif dataloader_neg is None and triplet==True:
            theta_pos,corr_pos,theta_neg,corr_neg = model(batch, triplet=True)
            inliers_pos = loss_fn(theta_pos,corr_pos)            
            inliers_neg = loss_fn(theta_neg,corr_neg)
            loss = torch.sum(inliers_neg - inliers_pos)
        test_loss += loss.data.cpu().numpy()[0]

    test_loss /= len(dataloader)
    print('Test set: Average loss: {:.4f}'.format(test_loss))
    return test_loss

def neg_hartmann6(X: Tensor) -> Tensor:
    r"""Negative Hartmann6 test function.

    Six-dimensional function (typically evaluated on `[0, 1]^6`)

        `H(x) = - sum_{i=1}^4 ALPHA_i exp( - sum_{j=1}^6 A_ij (x_j - P_ij)**2 )`

    H has a 6 local minima and a global minimum at

        `z = (0.20169, 0.150011, 0.476874, 0.275332, 0.311652, 0.6573)`

    with `H(z) = -3.32237`

    Args:
        X: A Tensor of size `6` or `k x 6` (k batch evaluations).

    Returns:
        `-H(X)`, the negative value of the standard Hartmann6 function.
    """
    batch = X.ndimension() > 1
    X = X if batch else X.unsqueeze(0)
    inner_sum = torch.sum(X.new(A) * (X.unsqueeze(1) - 0.0001 * X.new(P)) ** 2, dim=2)
    H = -torch.sum(X.new(ALPHA) * torch.exp(-inner_sum), dim=1)
    result = -H
    return result if batch else result.squeeze(0)

    def accGradParameters(self, input, gradOutput, scale=1):
        assert input.dim() == 2
        inputSize = self.weight.size(1)
        outputSize = self.weight.size(0)

        """
        dy_j            x_i                     w_ji
        ----- = -------------------  -  y_j -----------
        dw_ji   || w_j || * || x ||         || w_j ||^2
        """

        if self._weight is None:
            self._weight = self.weight.new()
        if self._sum is None:
            self._sum = input.new()

        self._weight.resize_as_(self.weight).copy_(self.weight)
        if self._gradOutput is None:
            self._gradOutput = gradOutput.new()
        self._gradOutput.resize_as_(gradOutput).copy_(gradOutput)
        self._gradOutput.mul_(self.output)
        torch.sum(self._gradOutput, 0, out=self._sum, keepdim=True)
        grad = self._sum[0]
        grad.div_(self._weightNorm.select(1, 0))
        self._weight.mul_(grad.view(outputSize, 1).expand_as(self._weight))

        input_ = self._gradOutput
        input_.resize_as_(input).copy_(input)
        input_.div_(self._inputNorm.expand_as(input))
        self._weight.addmm_(-1, 1, gradOutput.t(), input_)

        self._weight.div_(self._weightNorm.expand_as(self._weight))
        self.gradWeight.add_(self._weight)

def _mmd2(K_XX, K_XY, K_YY, const_diagonal=False, biased=False):
    m = K_XX.size(0)    # assume X, Y are same shape

    # Get the various sums of kernels that we'll use
    # Kts drop the diagonal, but we don't need to compute them explicitly
    if const_diagonal is not False:
        diag_X = diag_Y = const_diagonal
        sum_diag_X = sum_diag_Y = m * const_diagonal
    else:
        diag_X = torch.diag(K_XX)                       # (m,)
        diag_Y = torch.diag(K_YY)                       # (m,)
        sum_diag_X = torch.sum(diag_X)
        sum_diag_Y = torch.sum(diag_Y)

    Kt_XX_sums = K_XX.sum(dim=1) - diag_X             # \tilde{K}_XX * e = K_XX * e - diag_X
    Kt_YY_sums = K_YY.sum(dim=1) - diag_Y             # \tilde{K}_YY * e = K_YY * e - diag_Y
    K_XY_sums_0 = K_XY.sum(dim=0)                     # K_{XY}^T * e

    Kt_XX_sum = Kt_XX_sums.sum()                       # e^T * \tilde{K}_XX * e
    Kt_YY_sum = Kt_YY_sums.sum()                       # e^T * \tilde{K}_YY * e
    K_XY_sum = K_XY_sums_0.sum()                       # e^T * K_{XY} * e

    if biased:
        mmd2 = ((Kt_XX_sum + sum_diag_X) / (m * m)
            + (Kt_YY_sum + sum_diag_Y) / (m * m)
            - 2.0 * K_XY_sum / (m * m))
    else:
        mmd2 = (Kt_XX_sum / (m * (m - 1))
            + Kt_YY_sum / (m * (m - 1))
            - 2.0 * K_XY_sum / (m * m))

    return mmd2

    def _get_state_cost(self, worlds: List[WikiTablesWorld], state: CoverageState) -> torch.Tensor:
        if not state.is_finished():
            raise RuntimeError("_get_state_cost() is not defined for unfinished states!")
        world = worlds[state.batch_indices[0]]

        # Our checklist cost is a sum of squared error from where we want to be, making sure we
        # take into account the mask. We clamp the lower limit of the balance at 0 to avoid
        # penalizing agenda actions produced multiple times.
        checklist_balance = torch.clamp(state.checklist_state[0].get_balance(), min=0.0)
        checklist_cost = torch.sum((checklist_balance) ** 2)

        # This is the number of items on the agenda that we want to see in the decoded sequence.
        # We use this as the denotation cost if the path is incorrect.
        denotation_cost = torch.sum(state.checklist_state[0].checklist_target.float())
        checklist_cost = self._checklist_cost_weight * checklist_cost
        action_history = state.action_history[0]
        batch_index = state.batch_indices[0]
        action_strings = [state.possible_actions[batch_index][i][0] for i in action_history]
        logical_form = world.get_logical_form(action_strings)
        lisp_string = state.extras[batch_index]
        if self._executor.evaluate_logical_form(logical_form, lisp_string):
            cost = checklist_cost
        else:
            cost = checklist_cost + (1 - self._checklist_cost_weight) * denotation_cost
        return cost

def sample_from_discretized_mix_logistic_1d(l, nr_mix):
    # Pytorch ordering
    l = l.permute(0, 2, 3, 1)
    ls = [int(y) for y in l.size()]
    xs = ls[:-1] + [1] #[3]

    # unpack parameters
    logit_probs = l[:, :, :, :nr_mix]
    l = l[:, :, :, nr_mix:].contiguous().view(xs + [nr_mix * 2]) # for mean, scale

    # sample mixture indicator from softmax
    temp = torch.FloatTensor(logit_probs.size())
    if l.is_cuda : temp = temp.cuda()
    temp.uniform_(1e-5, 1. - 1e-5)
    temp = logit_probs.data - torch.log(- torch.log(temp))
    _, argmax = temp.max(dim=3)
   
    one_hot = to_one_hot(argmax, nr_mix)
    sel = one_hot.view(xs[:-1] + [1, nr_mix])
    # select logistic parameters
    means = torch.sum(l[:, :, :, :, :nr_mix] * sel, dim=4) 
    log_scales = torch.clamp(torch.sum(
        l[:, :, :, :, nr_mix:2 * nr_mix] * sel, dim=4), min=-7.)
    u = torch.FloatTensor(means.size())
    if l.is_cuda : u = u.cuda()
    u.uniform_(1e-5, 1. - 1e-5)
    u = Variable(u)
    x = means + torch.exp(log_scales) * (torch.log(u) - torch.log(1. - u))
    x0 = torch.clamp(torch.clamp(x[:, :, :, 0], min=-1.), max=1.)
    out = x0.unsqueeze(1)
    return out