本文整理匯總了Python中suds.client.Client.getTranscriptsAndInfo方法的典型用法代碼示例。如果您正苦於以下問題：Python Client.getTranscriptsAndInfo方法的具體用法？Python Client.getTranscriptsAndInfo怎麽用？Python Client.getTranscriptsAndInfo使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類suds.client.Client的用法示例。
在下文中一共展示了Client.getTranscriptsAndInfo方法的1個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。
示例1: main
# 需要導入模塊: from suds.client import Client [as 別名]
# 或者: from suds.client.Client import getTranscriptsAndInfo [as 別名]
def main(genomic_reference, gene=None):
"""
Get extended transcript information and print this to standard output.
"""
service = Client(WSDL_LOCATION, cache=None).service
result = service.getTranscriptsAndInfo(genomic_reference, gene)
if result:
for t in result.TranscriptInfo:
print """Transcript: %s
ID: %s
Product: %s
Locus tag: %s
Link method: %s
Translation:
Start: %s (c), %s (g), %s (chrom)
End: %s (c), %s (g), %s (chrom)
Sortable end: %s
CDS:
Start: %s (c), %s (g), %s (chrom)
End: %s (c), %s (g), %s (chrom)""" % \
(t.name, t.id, t.product, t.locusTag, t.linkMethod, t.cTransStart,
t.gTransStart, t.chromTransStart if 'chromTransStart' in t else '-',
t.cTransEnd, t.gTransEnd, t.chromTransEnd if 'chromTransEnd' in t else '-',
t.sortableTransEnd, t.cCDSStart, t.gCDSStart,
t.chromCDSStart if 'chromCDSStart' in t else '-', t.cCDSStop, t.gCDSStop,
t.chromCDSStop if 'chromCDSStop' in t else '-')
if 'proteinTranscript' in t:
print """ Protein:
Name: %s
ID: %s
Product: %s""" % \
(t.proteinTranscript.name, t.proteinTranscript.id,
t.proteinTranscript.product)
if 'exons' in t:
print ' Exons:'
for e in t.exons.ExonInfo:
print ' %s - %s (c), %s - %s (g), %s - %s (chrom)' % \
(e.cStart, e.cStop, e.gStart, e.gStop,
e.chromStart if 'chromStart' in e else '-',
e.chromStop if 'chromStop' in e else '-')