本文整理匯總了Python中pele.utils.disconnectivity_graph.DisconnectivityGraph.show方法的典型用法代碼示例。如果您正苦於以下問題：Python DisconnectivityGraph.show方法的具體用法？Python DisconnectivityGraph.show怎麽用？Python DisconnectivityGraph.show使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類pele.utils.disconnectivity_graph.DisconnectivityGraph的用法示例。
在下文中一共展示了DisconnectivityGraph.show方法的2個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。
示例1: make_graph
# 需要導入模塊: from pele.utils.disconnectivity_graph import DisconnectivityGraph [as 別名]
# 或者: from pele.utils.disconnectivity_graph.DisconnectivityGraph import show [as 別名]
def make_graph(database):
# make a graph from the database
graph = database2graph(database)
# turn the graph into a disconnectivity graph
dg = DisconnectivityGraph(graph,
nlevels=5,
center_gmin=False,
order_by_energy=True)
dg.calculate()
print "number of minima:", dg.tree_graph.number_of_leaves()
dg.plot()
dg.show()示例2: test_color_value
# 需要導入模塊: from pele.utils.disconnectivity_graph import DisconnectivityGraph [as 別名]
# 或者: from pele.utils.disconnectivity_graph.DisconnectivityGraph import show [as 別名]
def test_color_value(self):
dgraph = DisconnectivityGraph(self.tsgraph)
dgraph.calculate()
def minimum_to_value(m):
if m.energy < 5.:
return m.energy
else:
return None
dgraph.color_by_value(minimum_to_value)
dgraph.plot(linewidth=2.)
dgraph.label_minima({self.db.minima()[0]: "gmin",
self.db.minima()[1]: "2nd lowest"})
if _show:
from matplotlib import pyplot as plt
plt.title("color by value")
dgraph.show()