Python Parameterization.Parameterization類代碼示例

def step03( paramFile, num_people):
    #util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_example_1994_1999.txt')
    util = ParameterUtil(parameter_file = paramFile)

    myparams = Parameterization(util.keyword_decay, util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    myparams.generating_Training_Graph()
    selection = VariableSelection(myparams.trainnigGraph, util.nodes_notlinked_file,util.min_edges, False, num_people)
    return

def step05(paramFile):
    #util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_example_1994_1999.txt')
    util = ParameterUtil(parameter_file = paramFile)

    myparams = Parameterization(util.keyword_decay, util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    calc = Calculate(myparams, util.nodes_notlinked_file, util.calculated_file, util.ordered_file, util.maxmincalculated_file)
    myparams.generating_Test_Graph()
    analise = Analyse(myparams, FormatingDataSets.get_abs_file_path(util.calculated_file), FormatingDataSets.get_abs_file_path(util.analysed_file) + '.random.analised.txt', calc.qtyDataCalculated)

def step04(paramFile):
    #util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_example_1994_1999.txt')
    util = ParameterUtil(parameter_file = paramFile)

    myparams = Parameterization(util.keyword_decay, util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    myparams.generating_Training_Graph()
 
    calc = Calculate(myparams, util.nodes_notlinked_file, util.calculated_file, util.ordered_file, util.maxmincalculated_file)
    calc.Separating_calculateFile()

def step08(paramFile):
    #util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_example_1994_1999.txt')
    util = ParameterUtil(parameter_file = paramFile)

    myparams = Parameterization(util.keyword_decay, util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    myparams.generating_Training_Graph()
    myparams.generating_Test_Graph()
    print "Trainning Period:", myparams.t0, " - ", myparams.t0_
    print "Test Period:", myparams.t1, " - ", myparams.t1_
    
    print "# Papers in Trainning: ",  myparams.get_edges(myparams.trainnigGraph)
    print "# Authors in Training: ", myparams.get_nodes(myparams.trainnigGraph)
    print "# Papers in Test: ",  myparams.get_edges(myparams.testGraph)
    print "# Authors in Test", myparams.get_nodes(myparams.testGraph)
    
    calc = Calculate(myparams, util.nodes_notlinked_file, util.calculated_file, util.ordered_file, util.maxmincalculated_file)
    calc.reading_Max_min_file()
    print "# pair of Authors with at least 3 articles Calculated: ", calc.qtyDataCalculated  #FormatingDataSets.getTotalLineNumbers(FormatingDataSets.get_abs_file_path(util.calculated_file))
    topRank = Analyse.getTopRank(util.analysed_file+ '.random.analised.txt')
    print "# pair of Authors with at least 3 articles that is connected in Test Graph in a random way: ", topRank
    print "Max values found in calculations: ", str(calc.maxValueCalculated)
    print "Min Values found in calculations: ", str(calc.minValueCalculated)
    for pathFile in calc.getfilePathOrdered_separeted():
        print "File Analised: ", pathFile +  '.analised.txt'
        number_connected =  Analyse.getTopRankABSPathFiles(pathFile + '.analised.txt')
        print "# pair of Authors that is connected in Test Graph: ", number_connected
        print "%: ", Analyse.getLastInfosofResultsABSPathFiles(pathFile + '.analised.txt', topRank)
        print "---------------------------------"

def step07(paramFile):
    #util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_example_1994_1999.txt')
    util = ParameterUtil(parameter_file = paramFile)

    myparams = Parameterization(util.keyword_decay, util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    calc = Calculate(myparams, util.nodes_notlinked_file, util.calculated_file, util.ordered_file, util.maxmincalculated_file)
    myparams.generating_Test_Graph()
    topRank = Analyse.getTopRank(util.analysed_file + '.random.analised.txt')
    print 'Analising Files with TopRank', str(topRank)
    for OrderingFilePath in calc.getfilePathOrdered_separeted():
        analise = Analyse(myparams, OrderingFilePath, OrderingFilePath + '.analised.txt', topRank )

def execution(configFile):
    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #if not os.path.exists(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.fuzzyinputy.txt')):
    calculatingInputToFuzzy(myparams.trainnigGraph,nodeSelection.nodesNotLinked,  myparams)

def execution(configFile):
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'T.EXPERIMENTO_ATUAL_CORE03.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")

    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    nodesSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #GET THE AUTHORS THAT PUBLISH AT TRAINNING AND TEST 
    #A NUMBER OF PAPERS DEFINED AT MIN_EDGES IN CONFIG FILE
    nodes = nodesSelection.get_NowellAuthorsCore()
    #GET A PAIR OF AUTHORS THAT PUBLISH AT LEAST ONE ARTICLE AT TRAINNING AND TEST.
    #DID NOT SEE ANY NEED
    collaborations = nodesSelection.get_NowellColaboration()
    #GET THE FIRST EDGES MADE BY THE COMBINATION OF NODES IN TRAINNING GRAPH
    eOld = nodesSelection.get_NowellE(nodes,myparams.trainnigGraph)
    #GET THE FIRST EDGES MADE BY THE COMBINATION OF NODES IN TEST GRAPH THAT DO NOT HAVE EDGES IN TRAINNING
    eNew = nodesSelection.get_NowellE2(nodes, eOld, myparams.testGraph)
    #GET THE NODES NOT LINKED OVER THE COMBINATION NODES.
    nodesNotLinked = nodesSelection.get_PairsofNodesNotinEold(nodes)
    #CREATING CALCULATION OBJECT
    calc = CalculateInMemory(myparams,nodesNotLinked)
    #CALCULATING THE SCORES.
    resultsofCalculation = calc.executingCalculate()
    #ORDERNING THE RESULTS RETURNING THE TOP N 
    orderingResults = calc.ordering(len(eNew), resultsofCalculation)
    #SAVING THE ORDERED RESULTS.
    calc.saving_orderedResult(util.ordered_file, orderingResults)
    #ANALISE THE ORDERED RESULTS AND CHECK THE FUTURE.
    ScoresResults = Analyse.AnalyseNodesWithScoresInFuture(orderingResults, myparams.testGraph)
    #SAVING THE RESULTS.  
    for index in range(len(ScoresResults)):
        Analyse.saving_analyseResult(ScoresResults[index], util.analysed_file + str(myparams.ScoresChoiced[index][0] ) + '.txt')
        resultFile.write("TOTAL OF SUCESSS USING METRIC "  + str(myparams.ScoresChoiced[index][0])  + " = " +  str(Analyse.get_TotalSucess(ScoresResults[index]) ))
        resultFile.write("\n")
        resultFile.write("\n")
         
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(collaborations)*2)+ "\t\t" + str(len(nodes)) + "\t" + str(len(eOld))+"\t" + str(len(eNew)))
     
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile):
    
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'core03.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")

    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #if not os.path.exists(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.fuzzyinputy.txt')):
    data = calculatingInputToFuzzy(myparams.trainnigGraph,nodeSelection.nodesNotLinked,  myparams)
    dataSorted = sorted(data, key=lambda value: value['result'], reverse=True)
    
    topRank = len(nodeSelection.eNeW)
    totalCalculated = len(dataSorted)
    dataToAnalysed = []
    if (topRank >= totalCalculated):
        for item in range(totalCalculated):
            dataToAnalysed.append({'no1':  dataSorted[item]['no1'], 'no2': dataSorted[item]['no2'], 'result':  dataSorted[item]['result'] })
    else:
        for item in range(topRank):
            dataToAnalysed.append({'no1':  dataSorted[item]['no1'], 'no2': dataSorted[item]['no2'], 'result':  dataSorted[item]['result'] })
            
    
    analise = AnalyseNodesInFuture(dataToAnalysed, myparams.testGraph)
    
    resultFile.write( repr(get_TotalSucess(analise)) )   
    
    resultFile.write("\n")
#        
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(nodeSelection.get_NowellColaboration())*2)+ "\t\t" + str(len(nodeSelection.nodes)) + "\t" + str(len(nodeSelection.eOld))+"\t" + str(len(nodeSelection.eNeW)))
     
 
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile):
   
    
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'wTScore03_010304.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")

    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    db = None
    if not os.path.exists(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.base.pdl')):
        db = generateWeights(myparams.trainnigGraph, FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.base.pdl') , myparams)
    else:
        db = reading_Database(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.base.pdl'))
    calcDb = None
    if not os.path.exists(FormatingDataSets.get_abs_file_path(util.calculated_file + '.base.pdl')):
        calcDb = calculatingWeights(myparams.trainnigGraph, nodeSelection.nodesNotLinked, db, FormatingDataSets.get_abs_file_path(util.calculated_file) + '.base.pdl')
    else:
        calcDb = reading_Database(FormatingDataSets.get_abs_file_path(util.calculated_file + '.base.pdl'))
        
    ordering = get_ordering(calcDb, len(nodeSelection.eNeW))
    
    result = get_analyseNodesInFuture(ordering, myparams.testGraph)
    
    resultFile.write(repr(result))
    
    resultFile.write("\n")
#        
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(nodeSelection.get_NowellColaboration())*2)+ "\t\t" + str(len(nodeSelection.nodes)) + "\t" + str(len(nodeSelection.eOld))+"\t" + str(len(nodeSelection.eNeW)))
     
 
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile):
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'core03.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")
    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    
    #CREATING CALCULATION OBJECT
    weights = {'cn' : 1, 'aas': 1, 'pa':1, 'jc': 1, 'ts08':1,'ts05': 1, 'ts02':1}
    
    calc = CalculatingCombinationOnlyNowell(myparams, nodeSelection.nodesNotLinked,weights,False )

    saving_files_calculting(FormatingDataSets.get_abs_file_path(util.calculated_file), calc.results)
    
    Analise = nodeSelection.AnalyseAllNodesNotLinkedInFuture(nodeSelection.nodesNotLinked, myparams.testGraph)
    salvar_analise(FormatingDataSets.get_abs_file_path(util.analysed_file) + '.allNodes.csv', Analise)
    
    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile):
    
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'core03.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")

    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #if not os.path.exists(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.fuzzyinputy.txt')):
    data = calculatingInputToFuzzy(myparams.trainnigGraph,nodeSelection.nodesNotLinked,  myparams)
    saving_files_calculting_input(FormatingDataSets.get_abs_file_path(util.trainnig_graph_file + '.inputFuzzy.txt'), data)
    
    for item in data:
        calc = FuzzyCalculation(item['intensityno1'], item['intensityno2'], item['similarity'], item['ageno1'], item['ageno2'])
        print item['no1'], item['no2'], calc.potencial_ligacao, calc.grau_potencial_ligacao
        
        
       
    
    resultFile.write("\n")
#        
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(nodeSelection.get_NowellColaboration())*2)+ "\t\t" + str(len(nodeSelection.nodes)) + "\t" + str(len(nodeSelection.eOld))+"\t" + str(len(nodeSelection.eNeW)))
     
 
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile):
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'core03_execucaoFinal_cstT02.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    resultFile.write("\n")
    
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    #CREATING PARAMETRIZATION OBJECT WITH THE INFORMATIONS OF THE CONFIG FILE.
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)

    #GENERATING TRAINNING GRAPH BASED ON CONFIG FILE T0 AND T0_
    myparams.generating_Training_Graph()
      
    #GENERATING TEST GRAPH BASED ON CONcvb FIG FILE T1 AND T1_
    myparams.generating_Test_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #CREATING CALCULATION OBJECT
    calc = CalculatingTogether(myparams, nodeSelection.nodesNotLinked)
    
    ordering = calc.ordering(len(nodeSelection.eNeW))
    
    #calc.saving_orderedResult(util.ordered_file, ordering)
    
    calc.AnalyseNodesInFuture(ordering, myparams.testGraph)
    
    resultFile.write(repr(calc.get_TotalSucess()))
    
    resultFile.write("\n")
#        
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(nodeSelection.get_NowellColaboration())*2)+ "\t\t" + str(len(nodeSelection.nodes)) + "\t" + str(len(nodeSelection.eOld))+"\t" + str(len(nodeSelection.eNeW)))
     
 
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.datetime.now()))
    
    resultFile.close()

def execution(configFile, weights):
    #DEFINE THE FILE THAT WILL KEEP THE RESULT DATA
    resultFile = open(FormatingDataSets.get_abs_file_path(configFile + 'core03.txt'), 'w')
    
    resultFile.write("Inicio da operacao\n")
    resultFile.write(str(datetime.now()))
    resultFile.write("\n")
    #READING THE CONFIG FILE
    util = ParameterUtil(parameter_file = configFile)
    
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, linear_combination=util.linear_combination,
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None, result_random_file=util.result_random_file)
    
    myparams.generating_Test_Graph()
    myparams.generating_Training_Graph()
    
    nodeSelection = NodeSelection(myparams.trainnigGraph, myparams.testGraph, util)
    #CREATING CALCULATION OBJECT
    calc = CalculatingCombinationOnlyNowell(myparams, nodeSelection.nodesNotLinked, weights, True)
        
    ordering = calc.ordering(len(nodeSelection.eNeW))
    
    calc.AnalyseNodesInFuture(ordering, myparams.testGraph)
    
    resultFile.write(repr(calc.get_TotalSucess()))
    
    resultFile.write("\n")
#        
    resultFile.write("Authors\tArticles\tCollaborations\tAuthors\tEold\tEnew\n")
    resultFile.write( str(myparams.get_nodes(myparams.trainnigGraph))+ "\t" + str(myparams.get_edges(myparams.trainnigGraph)) + "\t\t" + str(len(nodeSelection.get_NowellColaboration())*2)+ "\t\t" + str(len(nodeSelection.nodes)) + "\t" + str(len(nodeSelection.eOld))+"\t" + str(len(nodeSelection.eNeW)))
     
 
    resultFile.write("\n")

    resultFile.write("Fim da Operacao\n")
    resultFile.write(str(datetime.now()))
    
    resultFile.close()

Created on Aug 22, 2015

@author: cptullio
Analysing the results
'''
from parametering.ParameterUtil import ParameterUtil
from parametering.Parameterization import Parameterization
from analysing.Analyse import Analyse
from calculating.VariableSelection import VariableSelection
from formating.FormatingDataSets import FormatingDataSets
import networkx
from calculating.CalculateInMemory import CalculateInMemory

if __name__ == '__main__':
    util = ParameterUtil(parameter_file = 'data/formatado/exemplomenor/config/config.txt')
    myparams = Parameterization(t0 = util.t0, t0_ = util.t0_, t1 = util.t1, t1_ = util.t1_, 
                                filePathGraph = util.graph_file, filePathTrainingGraph = util.trainnig_graph_file, filePathTestGraph = util.test_graph_file, decay = util.decay, domain_decay = util.domain_decay, min_edges = util.min_edges, scoreChoiced = util.ScoresChoiced, weightsChoiced = util.WeightsChoiced, weightedScoresChoiced = util.WeightedScoresChoiced, FullGraph = None)

    myparams.generating_Training_Graph()
    myparams.generating_Test_Graph()
    
    selection = VariableSelection(myparams.trainnigGraph, util.min_edges)
    nodesNotLinked = selection.get_pair_nodes_not_linked()
    calc = CalculateInMemory(myparams, nodesNotLinked)
    resultsCalculate = calc.executingCalculate()
    
    
    calc.Separating_calculateFile()
    analise = Analyse(myparams, FormatingDataSets.get_abs_file_path(util.calculated_file), FormatingDataSets.get_abs_file_path(util.analysed_file) + '.random.analised.txt', calc.qtyDataCalculated)
    topRank = Analyse.getTopRank(util.analysed_file + '.random.analised.txt')
    calc.Ordering_separating_File(topRank)
    for OrderingFilePath in calc.getfilePathOrdered_separeted():

'''
Created on Aug 22, 2015

@author: cptullio
Selecting all Nodes that will be calculated.
'''

from parametering.ParameterUtil import ParameterUtil
from parametering.Parameterization import Parameterization
from calculating.VariableSelection import VariableSelection
from calculating.Calculate import Calculate
from analysing.Analyse import Analyse
from formating.FormatingDataSets import FormatingDataSets

if __name__ == '__main__':
    util = ParameterUtil(parameter_file = 'data/formatado/arxiv/nowell_condmat_1994_1999.txt')
   
    myparams = Parameterization(util.top_rank, util.distanceNeighbors,util.lengthVertex, util.t0, util.t0_, util.t1, util.t1_, util.FeaturesChoiced, util.graph_file, util.trainnig_graph_file, util.test_graph_file, util.decay)
    myparams.generating_Training_Graph()
    selection = VariableSelection(myparams.trainnigGraph, util.nodes_notlinked_file)
    calc = Calculate(myparams, util.nodes_notlinked_file, util.calculated_file, util.ordered_file, util.maxmincalculated_file)
    calc.Separating_calculateFile()
    myparams.generating_Test_Graph()
    #analise = Analyse(myparams, FormatingDataSets.get_abs_file_path(util.calculated_file), FormatingDataSets.get_abs_file_path(util.analysed_file) + '.random.analised.txt', calc.qtyDataCalculated)
    topRank = Analyse.getTopRank(util.analysed_file + '.random.analised.txt')
    calc.Ordering_separating_File(topRank)