Python ConfigUtils.buildReverseAlternativeDictionaryFromConfig方法代碼示例

本文整理匯總了Python中oncotator.utils.ConfigUtils.ConfigUtils.buildReverseAlternativeDictionaryFromConfig方法的典型用法代碼示例。如果您正苦於以下問題：Python ConfigUtils.buildReverseAlternativeDictionaryFromConfig方法的具體用法？Python ConfigUtils.buildReverseAlternativeDictionaryFromConfig怎麽用？Python ConfigUtils.buildReverseAlternativeDictionaryFromConfig使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類oncotator.utils.ConfigUtils.ConfigUtils的用法示例。

在下文中一共展示了ConfigUtils.buildReverseAlternativeDictionaryFromConfig方法的2個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。

示例1: createConfigTableKeys

# 需要導入模塊: from oncotator.utils.ConfigUtils import ConfigUtils [as 別名]
# 或者: from oncotator.utils.ConfigUtils.ConfigUtils import buildReverseAlternativeDictionaryFromConfig [as 別名]
    def createConfigTableKeys(self, configParser, configTable):
        # Parse fields from FORMAT section of the config file
        """


        :param configParser:
        :param configTable:
        """
        table = ConfigUtils.buildReverseAlternativeDictionaryFromConfig(configParser, "INFO")
        for ID, name in table.items():
            configTable.addInfoFieldID(ID, name)

        # Parse fields from FORMAT section of the config file
        table = ConfigUtils.buildReverseAlternativeDictionaryFromConfig(configParser, "FORMAT")
        for ID, name in table.items():
            configTable.addFormatFieldID(ID, name)

        # Parse fields from NOT_SPLIT_TAGS section of the config file
        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "NOT_SPLIT_TAGS")
        for fieldType, IDs in table.items():
            configTable.addFieldIDsToNotSplitSet(fieldType, IDs)

        # Parse fields from SPLIT_TAGS section of the config file
        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "SPLIT_TAGS")
        for fieldType, IDs in table.items():
            configTable.addFieldIDsToSplitSet(fieldType, IDs)

開發者ID:Tmacme，項目名稱:oncotator，代碼行數:28，代碼來源:VcfInputConfigTableCreator.py

示例2: createConfigTableKeys

# 需要導入模塊: from oncotator.utils.ConfigUtils import ConfigUtils [as 別名]
# 或者: from oncotator.utils.ConfigUtils.ConfigUtils import buildReverseAlternativeDictionaryFromConfig [as 別名]
    def createConfigTableKeys(self, configParser, configTable):
        # Parse fields from FORMAT section of the config file
        """


        :param configParser:
        :param configTable:
        """
        # Parse fields from INFO section of the config file
        table = ConfigUtils.buildReverseAlternativeDictionaryFromConfig(configParser, "INFO")
        for name, ID in table.items():
            configTable.addInfoFieldName(name, ID)

        table = ConfigUtils.buildReverseAlternativeDictionaryFromConfig(configParser, "FORMAT")
        for name, ID in table.items():
            configTable.addFormatFieldName(name, ID)

        table = ConfigUtils.buildReverseAlternativeDictionaryFromConfig(configParser, "OTHER")
        for name, ID in table.items():
            configTable.addOtherFieldName(name, ID)

        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "INFO_DESCRIPTION")
        for name, description in table.items():
            configTable.addInfoFieldNameDescription(name, string.join(description, ","))

        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "FORMAT_DESCRIPTION")
        for name, description in table.items():
            configTable.addFormatFieldNameDescription(name, string.join(description, ","))

        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "FILTER_DESCRIPTION")
        for name, description in table.items():
            configTable.addFilterFieldNameDescription(name, string.join(description, ","))

        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "SPLIT_TAGS")
        for fieldType, names in table.items():
            configTable.addFieldNamesToSplitSet(fieldType, names)

        table = ConfigUtils.buildAlternateKeyDictionaryFromConfig(configParser, "NOT_SPLIT_TAGS")
        for fieldType, names in table.items():
            configTable.addFieldNamesToNotSplitSet(fieldType, names)

開發者ID:jcambry，項目名稱:oncotator，代碼行數:42，代碼來源:VcfOutputConfigTableCreator.py

注：本文中的oncotator.utils.ConfigUtils.ConfigUtils.buildReverseAlternativeDictionaryFromConfig方法示例由純淨天空整理自Github/MSDocs等開源代碼及文檔管理平台，相關代碼片段篩選自各路編程大神貢獻的開源項目，源碼版權歸原作者所有，傳播和使用請參考對應項目的License；未經允許，請勿轉載。