本文整理匯總了Python中hgu.Util.debugging方法的典型用法代碼示例。如果您正苦於以下問題：Python Util.debugging方法的具體用法？Python Util.debugging怎麽用？Python Util.debugging使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類hgu.Util的用法示例。
在下文中一共展示了Util.debugging方法的1個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。
示例1: _processNode
# 需要導入模塊: from hgu import Util [as 別名]
# 或者: from hgu.Util import debugging [as 別名]
def _processNode(node, parentApo, rank, depth, isPrimaryPath):
"""
Generate part of records for an anatomy node, and all its children.
"""
if Util.debugging():
Util.debugMessage([
"In _processnode.",
"Node: " + node.getPublicId() + " '" +
node.getComponentName() + "'",
"Rank: " + str(rank) + " Depth: " + str(depth)])
# Generate record for this node.
anatApo = AnadPartOfDb.AnadPartOfDbRecord()
anatApo.setOid(rank)
anatApo.setSpecies(node.getSpecies())
anatApo.setNodeOid(node.getOid())
anatApo.setSequence(rank)
anatApo.setDepth(depth)
anatApo.setIsPrimaryPath(isPrimaryPath)
# Gather stage range of anatomy node
nodeStartStage, nodeEndStage = Nodes.getStageWindowForNodeOid(node.getOid())
StartStage = Stages.getByOid(nodeStartStage.getOid())
EndStage = Stages.getByOid(nodeEndStage.getOid())
if parentApo != None:
anatApo.setParentApoOid(parentApo.getOid())
anatApo.setFullPath(parentApo.getFullPath() + "." +
node.getComponentName())
anatApo.setFullPathOids(parentApo.getFullPathOids() + "." +
str(node.getOid()))
anatApo.setFullPathEmapas(parentApo.getFullPathEmapas() + "." +
str(node.getPublicId()))
anatApo.setFullPathJsonHead(parentApo.getFullPathJsonHead() +
'{\"attr\": { \"ext_id\": \"' + node.getPublicId() +
'\", \"id\": \"li.node.BRANCH.Abstract.id' + str(node.getOid()) +
'\", \"name\": \"' + node.getComponentName() +
'\", \"start\": \"' + StartStage.getName() +
'\", \"end\": \"' + EndStage.getName() +
'\"}, \"data\": \"' + node.getComponentName() +
'\", \"state\": \"open\", \"children\": [')
anatApo.setFullPathJsonTail(parentApo.getFullPathJsonTail() + ']}')
else:
anatApo.setFullPath(node.getComponentName())
anatApo.setFullPathOids(str(node.getOid()))
anatApo.setFullPathEmapas(str(node.getPublicId()))
anatApo.setFullPathJsonHead(
'{\"attr\": { \"ext_id\": \"' + node.getPublicId() +
'\", \"id\": \"li.node.BRANCH.Abstract.id' + str(node.getOid()) +
'\", \"name\": \"' + node.getComponentName() +
'\", \"start\": \"' + StartStage.getName() +
'\", \"end\": \"' + EndStage.getName() +
'\"}, \"data\": \"' + node.getComponentName() +
'\", \"state\": \"open\", \"children\": [')
anatApo.setFullPathJsonTail(']}')
# Gather stage range of anatomy node
anatApo.setNodeStartStageOid(nodeStartStage.getOid())
anatApo.setNodeEndStageOid(nodeEndStage.getOid())
# Path start and end stages may be narrower than node start and
# end stages. Used to reason about what parts of the tree to display
# for what stages.
pathStartStage = nodeStartStage
pathEndStage = nodeEndStage
if parentApo:
parentPathStartStage = Stages.getByOid(parentApo.getPathStartStageOid())
parentPathEndStage = Stages.getByOid(parentApo.getPathEndStageOid())
if pathStartStage.getSequence() < parentPathStartStage.getSequence():
pathStartStage = parentPathStartStage
if pathEndStage.getSequence() > parentPathEndStage.getSequence():
pathEndStage = parentPathEndStage
anatApo.setPathStartStageOid(pathStartStage.getOid())
anatApo.setPathEndStageOid(pathEndStage.getOid())
if pathStartStage.getSequence() > pathEndStage.getSequence():
Util.fatalError(["Bad path stage range"])
# part of record fully populated. Add it to database and to this module's
# knowledge base.
anatApo.insert()
_addToKnowledge(anatApo, deferReverse = True)
# Other globals populated after everything has been created.
rank += 1
# Generate records, recursively, depth first, left to right, for all
# its children.
childIsPrimary = isPrimaryPath and node.isPrimary()
childRels = Relationships.getByParentOid(node.getOid())
for childRel in childRels:
childOid = childRel.getChildOid()
#.........這裏部分代碼省略.........