本文整理匯總了Python中add.Add.add_one_sample方法的典型用法代碼示例。如果您正苦於以下問題：Python Add.add_one_sample方法的具體用法？Python Add.add_one_sample怎麽用？Python Add.add_one_sample使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類add.Add的用法示例。
在下文中一共展示了Add.add_one_sample方法的1個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。
示例1: add
# 需要導入模塊: from add import Add [as 別名]
# 或者: from add.Add import add_one_sample [as 別名]
def add(self):
adder = Add()
if self.args['one_sample'] is not None:
new_sample = [tuple(entry.strip('}').strip('{').strip(',').split(':')) for entry in self.args['one_sample']]
new_sample = dict(new_sample)
adder.add_one_sample(new_sample)
if len(self.args['email']) > 0:
if not sampleinfo_mongo.is_fully_annotated(new_sample['SAMPLE']):
annotate = Annotate()
annotate.annotate_sample(new_sample['SAMPLE'], 'orig')
output_files = Output()
final_file = output_files.sample_variants_csv(new_sample['SAMPLE'], 'orig')
message = "Here are all the variants for the sample %s with their QC status." % new_sample['SAMPLE']
for address in self.args['email']:
self.__log_sending_email(address)
output_bash.email_file(message, final_file, address)
elif self.args['sample_info'] is not None:
adder.add_sample_info(self.args['sample_info'])