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Python Struct.column2vals方法代碼示例

本文整理匯總了Python中Struct.Struct.column2vals方法的典型用法代碼示例。如果您正苦於以下問題:Python Struct.column2vals方法的具體用法?Python Struct.column2vals怎麽用?Python Struct.column2vals使用的例子?那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在Struct.Struct的用法示例。


在下文中一共展示了Struct.column2vals方法的1個代碼示例,這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚,您的評價將有助於係統推薦出更棒的Python代碼示例。

示例1: load_elution

# 需要導入模塊: from Struct import Struct [as 別名]
# 或者: from Struct.Struct import column2vals [as 別名]
def load_elution(fname, getname=True):
    # expected file structure:
    # first col: gene id
    # second col: treat differently if 2nd col header is 'Total' or
    # 'Description'
    # remaining cols: elution profile data
    lines = [l for l in ut.load_tab_file(fname)]
    # final row: total count in msblender output; don't skip in cuihong's data
    skip_final_row = lines[-1][0][0] == "#"
    rows = lines[1:-1] if skip_final_row else lines[1:]
    fractions = [f for f in lines[0][1:]]
    if fractions[0].lower() in ["total", "totalcount", "description"]:
        start_data_col = 2
        fractions.remove(fractions[0])
    else:
        start_data_col = 1
    mat = np.matrix([row[start_data_col:] for row in rows], dtype="float32")
    prots = [row[0] for row in rows]
    elut = Struct(mat=mat, prots=prots, fractions=fractions, filename=fname, filename_original=fname)
    if start_data_col == 2:
        col2name_vals = [row[1] for row in rows]
        elut.column2vals = col2name_vals
    if getname:
        elut.name = os.path.basename(fname).split(".")[0]
    return elut
開發者ID:marcottelab,項目名稱:infer_complexes,代碼行數:27,代碼來源:elution.py


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