Java OWLOntologyManager.removeOntology方法代碼示例

import org.semanticweb.owlapi.model.OWLOntologyManager; //導入方法依賴的package包/類
@Override
public InferenceProvider create(ModelContainer model) throws OWLOntologyCreationException, InterruptedException {
	OWLOntology ont = model.getAboxOntology();
	final OWLOntologyManager m = ont.getOWLOntologyManager();
	OWLOntology module = null;
	OWLReasoner reasoner = null;
	try {
		InferenceProvider provider;
		synchronized (ont) {
			concurrentLock.acquire();
			try {
				if (useSLME) {
					LOG.info("Creating for module: "+model.getModelId());
					ModuleType mtype = ModuleType.BOT;
					SyntacticLocalityModuleExtractor sme = new SyntacticLocalityModuleExtractor(m, ont, mtype);
					Set<OWLEntity> seeds = new HashSet<OWLEntity>(ont.getIndividualsInSignature());
					module = ont = sme.extractAsOntology(seeds, IRI.generateDocumentIRI());
					LOG.info("Done creating module: "+model.getModelId());
				}
				reasoner = rf.createReasoner(ont);
				provider = MapInferenceProvider.create(reasoner, ont);
			}
			finally {
				concurrentLock.release();
			}
		}
		return provider;
	}
	finally {
		if (reasoner != null) {
			reasoner.dispose();
		}
		if (module != null) {
			m.removeOntology(module);
		}
	}
	
}
 

import org.semanticweb.owlapi.model.OWLOntologyManager; //導入方法依賴的package包/類
public void dispose() {
	final OWLOntologyManager m = getOWLOntologyManager();
	if (aboxOntology != null) {
		m.removeOntology(aboxOntology);
	}
	
	for(ModelChangeListener listener : listeners) {
		listener.dispose();
	}
	listeners.clear();
}
 

import org.semanticweb.owlapi.model.OWLOntologyManager; //導入方法依賴的package包/類
/**
 * Generates a blank model
 * 
 * @param metadata
 * @return modelId
 * @throws OWLOntologyCreationException
 */
public ModelContainer generateBlankModel(METADATA metadata)
		throws OWLOntologyCreationException {

	// Create an arbitrary unique ID and add it to the system.
	IRI modelId = generateId(modelIdPrefix);
	if (modelMap.containsKey(modelId)) {
		throw new OWLOntologyCreationException(
				"A model already exists for this db: " + modelId);
	}
	LOG.info("Generating blank model for new modelId: " + modelId);

	// create empty ontology, use model id as ontology IRI
	final OWLOntologyManager m = graph.getManager();
	final OWLOntology tbox = graph.getSourceOntology();
	OWLOntology abox = null;
	ModelContainer model = null;
	try {
		abox = m.createOntology(modelId);

		// add imports to T-Box and additional ontologies via IRI
		createImports(abox, tbox.getOntologyID(), metadata);

		// generate model
		model = new ModelContainer(modelId, tbox, abox);
	} catch (OWLOntologyCreationException exception) {
		if (abox != null) {
			m.removeOntology(abox);
		}
		throw exception;
	}
	// add to internal map
	modelMap.put(modelId, model);
	return model;
}
 

import org.semanticweb.owlapi.model.OWLOntologyManager; //導入方法依賴的package包/類
/**
 * Experimental method for trying out the loading of complex_annotation doc type
 * 
 * @param opts
 * @throws Exception
 */
@CLIMethod("--solr-load-complex-annotations")
public void experimentalLoadComplexAnnotationSolr(Opts opts) throws Exception {

	// Check to see if the global url has been set.
	String url = sortOutSolrURL(globalSolrURL);				

	// Only proceed if our environment was well-defined.
	if( legoCatalogs == null || legoFiles == null || legoCatalogs.isEmpty() || legoFiles.isEmpty() ){
		LOG.warn("Lego environment not well defined--skipping.");
	}else{

		// Ready the environment for every pass.
		ParserWrapper pw = new ParserWrapper();
		// Add all of the catalogs.
		for( File legoCatalog : legoCatalogs ){
			pw.addIRIMapper(new CatalogXmlIRIMapper(legoCatalog));				
		}
		OWLOntologyManager manager = pw.getManager();
		OWLReasonerFactory reasonerFactory = new ElkReasonerFactory();
			
		// Actual loading--iterate over our list and load individually.
		for( File legoFile : legoFiles ){
			String fname = legoFile.getName();
			OWLReasoner currentReasoner = null;
			OWLOntology ontology = null;

			// TODO: Temp cover for missing group labels and IDs.
			//String agID = legoFile.getCanonicalPath();
			String agLabel = StringUtils.removeEnd(fname, ".owl");
			String agID = new String(agLabel);

			try {
				ontology = pw.parseOWL(IRI.create(legoFile));
				currentReasoner = reasonerFactory.createReasoner(ontology);
					
				// Some sanity checks--some of the genereated ones are problematic.
				boolean consistent = currentReasoner.isConsistent();
				if( consistent == false ){
					LOG.info("Skip since inconsistent: " + fname);
					continue;
				}
				Set<OWLClass> unsatisfiable = currentReasoner.getUnsatisfiableClasses().getEntitiesMinusBottom();
				
				// TODO - make configurable to allow fail fast
				if (unsatisfiable.isEmpty() == false) {
					LOG.info("Skip since unsatisfiable: " + fname);
					continue;
				}
				
				Set<OWLNamedIndividual> individuals = ontology.getIndividualsInSignature();
				Set<OWLAnnotation> modelAnnotations = ontology.getAnnotations();
				OWLGraphWrapper currentGraph = new OWLGraphWrapper(ontology);						
				try {
					LOG.info("Trying complex annotation load of: " + fname);
					ComplexAnnotationSolrDocumentLoader loader =
							new ComplexAnnotationSolrDocumentLoader(url, currentGraph, currentReasoner, individuals, modelAnnotations, agID, agLabel, fname);
					loader.load();
				} catch (SolrServerException e) {
					LOG.info("Complex annotation load of " + fname + " at " + url + " failed!");
					e.printStackTrace();
					System.exit(1);
				}
			} finally {
				// Cleanup reasoner and ontology.
				if (currentReasoner != null) {
					currentReasoner.dispose();
				}
				if (ontology != null) {
					manager.removeOntology(ontology);
				}
			}
		}
	}
}
 

import org.semanticweb.owlapi.model.OWLOntologyManager; //導入方法依賴的package包/類
/**
 * Experimental method for trying out the loading of complex_annotation doc type.
 * Works with --read-ca-list <file>.
 * 
 * @param opts
 * @throws Exception
 */
@CLIMethod("--solr-load-complex-exp")
public void loadComplexAnnotationSolr(Opts opts) throws Exception {

	// Check to see if the global url has been set.
	String url = sortOutSolrURL(globalSolrURL);				

	// Only proceed if our environment was well-defined.
	if( caFiles == null || caFiles.isEmpty() ){
		LOG.warn("LEGO environment not well defined--will skip loading LEGO/CA.");
	}else{

		// NOTE: These two lines are remainders from old code, and I'm not sure of their place in this world of ours.
		// I wish there was an arcitecture diagram somehwere...
		OWLOntologyManager manager = pw.getManager();
		OWLReasonerFactory reasonerFactory = new ElkReasonerFactory();
			
		// Actual loading--iterate over our list and load individually.
		for( String fname : caFiles ){
			OWLReasoner currentReasoner = null;
			OWLOntology ontology = null;

			// TODO: Temp cover for missing group labels and IDs.
			//String agID = legoFile.getCanonicalPath();
			String pretmp = StringUtils.removeEnd(fname, ".owl");
			String[] bits = StringUtils.split(pretmp, "/");
			String agID = bits[bits.length -1];
			String agLabel = new String(StringUtils.replaceOnce(agID, ":", "_"));
			
			try {
				ontology = pw.parseOWL(IRI.create(fname));
				currentReasoner = reasonerFactory.createReasoner(ontology);
					
				// Some sanity checks--some of the genereated ones are problematic.
				boolean consistent = currentReasoner.isConsistent();
				if( consistent == false ){
					LOG.info("Skip since inconsistent: " + fname);
					continue;
				}
				Set<OWLClass> unsatisfiable = currentReasoner.getUnsatisfiableClasses().getEntitiesMinusBottom();
				if (unsatisfiable.isEmpty() == false) {
					LOG.info("Skip since unsatisfiable: " + fname);
					continue;
				}
				
				Set<OWLNamedIndividual> individuals = ontology.getIndividualsInSignature();
				Set<OWLAnnotation> modelAnnotations = ontology.getAnnotations();
				OWLGraphWrapper currentGraph = new OWLGraphWrapper(ontology);						
				try {
					LOG.info("Trying complex annotation load of: " + fname);
					ComplexAnnotationSolrDocumentLoader loader =
							new ComplexAnnotationSolrDocumentLoader(url, currentGraph, currentReasoner, individuals, modelAnnotations, agID, agLabel, fname);
					loader.load();
				} catch (SolrServerException e) {
					LOG.info("Complex annotation load of " + fname + " at " + url + " failed!");
					e.printStackTrace();
					System.exit(1);
				}
			} finally {
				// Cleanup reasoner and ontology.
				if (currentReasoner != null) {
					currentReasoner.dispose();
				}
				if (ontology != null) {
					manager.removeOntology(ontology);
				}
			}
		}
	}
}