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Java BasicFastqWriter類代碼示例

本文整理匯總了Java中htsjdk.samtools.fastq.BasicFastqWriter的典型用法代碼示例。如果您正苦於以下問題:Java BasicFastqWriter類的具體用法?Java BasicFastqWriter怎麽用?Java BasicFastqWriter使用的例子?那麽, 這裏精選的類代碼示例或許可以為您提供幫助。


BasicFastqWriter類屬於htsjdk.samtools.fastq包,在下文中一共展示了BasicFastqWriter類的2個代碼示例,這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚,您的評價將有助於係統推薦出更棒的Java代碼示例。

示例1: openFastqWriter

import htsjdk.samtools.fastq.BasicFastqWriter; //導入依賴的package包/類
/** Open a new FASTQ writer from a Path. */
public FastqWriter openFastqWriter(final Path path) {
    checkOutputAndCreateDirs(path);
    final PrintStream writer = new PrintStream(getOutputStream(path));
    final FastqWriter fastqWriter = new BasicFastqWriter(writer);
    return (this.useAsyncIo)
            ? new AsyncFastqWriter(fastqWriter, asyncOutputBufferSize)
            : fastqWriter;
}
 
開發者ID:magicDGS,項目名稱:ReadTools,代碼行數:10,代碼來源:ReadWriterFactory.java

示例2: setOutputStream

import htsjdk.samtools.fastq.BasicFastqWriter; //導入依賴的package包/類
@Override
public void setOutputStream(final OutputStream os) {
    writer = new BasicFastqWriter(new PrintStream(os));
}
 
開發者ID:broadinstitute,項目名稱:picard,代碼行數:5,代碼來源:IlluminaBasecallsToFastq.java


注:本文中的htsjdk.samtools.fastq.BasicFastqWriter類示例由純淨天空整理自Github/MSDocs等開源代碼及文檔管理平台,相關代碼片段篩選自各路編程大神貢獻的開源項目,源碼版權歸原作者所有,傳播和使用請參考對應項目的License;未經允許,請勿轉載。